| SRR358795 | callus | wt | 2.01 | MC |
| SRR358796 | callus | wt | 2.50 | MC |
| SRR358797 | callus | wt | 2.27 | MC |
| SRR358798 | callus | wt | 2.79 | MC |
| SRR7265404 | coleoptile | 2dN | 0.40 | MC |
| SRR7265405 | coleoptile | 2dN | 0.30 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.45 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.83 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.55 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.26 | MC |
| SRR7265376 | embryo | 1hA | 2.87 | MC |
| SRR7265377 | embryo | 1hA | 2.72 | MC |
| SRR7265379 | embryo | 1hN | 0.95 | MC |
| SRR7265380 | embryo | 1hN | 1.94 | MC |
| SRR7265381 | embryo | 1hN | 1.25 | MC |
| SRR7265388 | embryo | 12hA | 0.88 | MC |
| SRR7265389 | embryo | 12hA | 1.54 | MC |
| SRR7265390 | embryo | 12hA | 1.26 | MC |
| SRR7265391 | embryo | 12hN | 3.20 | MC |
| SRR7265392 | embryo | 12hN | 1.77 | MC |
| SRR7265393 | embryo | 12hN | 2.54 | MC |
| SRR7265395 | embryo | 24hA | 0.47 | MC |
| SRR7265397 | embryo | 24hN | 1.08 | MC |
| SRR7265398 | embryo | 24hN | 1.36 | MC |
| SRR7265399 | embryo | 24hN | 0.75 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.48 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.84 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.86 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.25 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.47 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.18 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.26 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.21 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.53 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.20 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.69 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.14 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.21 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.47 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.18 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.74 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.74 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.01 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.42 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.87 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.29 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.48 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.92 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.29 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.16 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.81 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.42 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.41 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.54 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.50 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.68 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.44 | MC |
| SRR1761528 | leaf | drought | 2.58 | MC |
| SRR1761529 | leaf | drought | 2.43 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.89 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.18 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.03 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.09 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.88 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.47 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.86 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.90 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.89 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.25 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.64 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR1213693 | leaf | wt | 0.30 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.41 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.33 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.70 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.55 | MC |
| SRR6168973 | leaf | none (control) | 0.29 | MC |
| SRR6168974 | leaf | none (control) | 1.82 | MC |
| SRR6168975 | leaf | none (control) | 0.60 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.38 | MC |
| SRR6168979 | leaf | none (control) | 1.58 | MC |
| SRR6168981 | leaf | none (control) | 0.32 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.60 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.98 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.61 | MC |
| SRR5126147 | root | "mock,1_day" | 1.20 | MC |
| SRR5126148 | root | "mock,1_day" | 0.33 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.74 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.84 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126155 | root | "mock,7_days" | 0.84 | MC |
| SRR5126157 | root | "mock,7_days" | 0.60 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.77 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.35 | MC |
| SRR5126165 | root | "mock,14_days" | 4.65 | MC |
| SRR5126167 | root | "mock,14_days" | 1.06 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.35 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.30 | MC |
| SRR1213694 | root | wt | 0.30 | MC |
| SRR1213695 | root | wt | 0.14 | MC |
| SRR4947482 | root | Al | 0.63 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.39 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.44 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.43 | MC |
| SRR2154087 | seedling | wt | 0.36 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.80 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.87 | MC |
| SRR358792 | seedling | wt | 0.59 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.27 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.40 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.42 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.71 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.82 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.54 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.38 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.53 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.57 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.66 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.80 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.35 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.01 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.68 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.50 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.17 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.76 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.46 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.36 | MC |