| SRR4457252 | 2nd_leaf | DAH12 | 0.66 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.62 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.40 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.62 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.54 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.74 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.51 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.30 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.74 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.39 | MC |
| SRR3745125 | anther | wt | 1.46 | MC |
| SRR3745126 | anther | wt | 1.38 | MC |
| SRR3745127 | anther | wt | 1.33 | MC |
| SRR6320498 | carpel | wt | 5.93 | MC |
| SRR5560727 | caryopsis | wild_type | 0.39 | MC |
| SRR5560728 | caryopsis | wild_type | 1.75 | MC |
| SRR5560729 | caryopsis | wild_type | 5.08 | MC |
| SRR7265400 | coleoptile | 2dA | 0.31 | MC |
| SRR7265401 | coleoptile | 2dA | 0.29 | MC |
| SRR7265403 | coleoptile | 2dN | 1.59 | MC |
| SRR7265404 | coleoptile | 2dN | 1.13 | MC |
| SRR7265405 | coleoptile | 2dN | 1.07 | MC |
| SRR7265409 | coleoptile | 3dN | 0.53 | MC |
| SRR7265410 | coleoptile | 3dN | 0.53 | MC |
| SRR7265411 | coleoptile | 3dN | 0.65 | MC |
| SRR7265415 | coleoptile | 4dN | 0.89 | MC |
| SRR7265416 | coleoptile | 4dN | 0.68 | MC |
| SRR7265417 | coleoptile | 4dN | 0.64 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.50 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.07 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.73 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.34 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.80 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.48 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.38 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.59 | MC |
| SRR7265382 | embryo | 3hA | 3.41 | MC |
| SRR7265383 | embryo | 3hA | 4.42 | MC |
| SRR7265388 | embryo | 12hA | 1.07 | MC |
| SRR7265389 | embryo | 12hA | 1.68 | MC |
| SRR7265390 | embryo | 12hA | 1.54 | MC |
| SRR7265391 | embryo | 12hN | 1.97 | MC |
| SRR7265392 | embryo | 12hN | 1.71 | MC |
| SRR7265393 | embryo | 12hN | 1.68 | MC |
| SRR7265395 | embryo | 24hA | 0.78 | MC |
| SRR7265396 | embryo | 24hA | 0.61 | MC |
| SRR7265397 | embryo | 24hN | 2.00 | MC |
| SRR7265398 | embryo | 24hN | 2.53 | MC |
| SRR7265399 | embryo | 24hN | 1.47 | MC |
| SRR2338866 | endosprem | control | 1.37 | MC |
| SRR2338868 | endosprem | high_temperature | 0.75 | MC |
| SRR2338869 | endosprem | high_temperature | 0.57 | MC |
| SRR976168 | flag_leaf | wild_type | 1.12 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.26 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.43 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.36 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.60 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.78 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.43 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.27 | MC |
| SRR1213691 | flower | wt | 0.77 | MC |
| SRR8060836 | leaf | wild_type | 0.30 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.87 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.62 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.48 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.42 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.62 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.48 | MC |
| SRR1761529 | leaf | drought | 0.62 | MC |
| SRR1761530 | leaf | control | 0.48 | MC |
| SRR1761531 | leaf | control | 0.42 | MC |
| SRR504365 | leaf | wt | 0.31 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.29 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.25 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.45 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.32 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.49 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.21 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.39 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.58 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.44 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.37 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.68 | MC |
| SRR5856927 | leaf | control | 0.19 | MC |
| SRR5856928 | leaf | control | 0.35 | MC |
| SRR5856930 | leaf | salt | 0.30 | MC |
| SRR5856931 | leaf | salt | 0.26 | MC |
| SRR5856932 | leaf | salt | 0.31 | MC |
| SRR5856933 | leaf | control | 0.49 | MC |
| SRR5856934 | leaf | control | 0.64 | MC |
| SRR5856935 | leaf | control | 0.27 | MC |
| SRR5856936 | leaf | salt | 0.38 | MC |
| SRR5856937 | leaf | salt | 0.28 | MC |
| SRR5856938 | leaf | salt | 0.28 | MC |
| SRR5110429 | panicle | Dawn | 2.98 | MC |
| SRR5110430 | panicle | Dawn | 1.41 | MC |
| SRR5110431 | panicle | Dawn | 2.34 | MC |
| SRR5110432 | panicle | Dawn | 2.76 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.01 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.75 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.15 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.30 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.90 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.86 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.92 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.80 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.36 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.13 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.61 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.29 | MC |
| SRR5110445 | panicle | Dusk | 0.44 | MC |
| SRR5110446 | panicle | Dusk | 0.91 | MC |
| SRR5110447 | panicle | Dusk | 0.77 | MC |
| SRR5110448 | panicle | Dusk | 1.02 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.80 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.13 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.37 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.91 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.23 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.08 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.36 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.84 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.87 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.94 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.31 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.25 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.09 | MC |
| SRR1633185 | panicle | WT | 1.18 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.02 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.68 | MC |
| SRR5126147 | root | "mock,1_day" | 0.62 | MC |
| SRR5126148 | root | "mock,1_day" | 0.50 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.77 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.15 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.74 | MC |
| SRR5126153 | root | "mock,7_days" | 0.60 | MC |
| SRR5126155 | root | "mock,7_days" | 0.61 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.00 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.63 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.92 | MC |
| SRR5126165 | root | "mock,14_days" | 1.33 | MC |
| SRR5126167 | root | "mock,14_days" | 1.24 | MC |
| SRR5126169 | root | "mock,14_days" | 0.48 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.62 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.32 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.64 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.57 | MC |
| SRR1213694 | root | wt | 0.26 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.69 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.28 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.31 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.22 | MC |
| SRR2154083 | seedling | wt | 0.38 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.60 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.22 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.02 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.41 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.48 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.34 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.99 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.34 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.76 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.35 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.35 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.46 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.40 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.32 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.54 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.45 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.79 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.86 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.44 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.07 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.39 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.48 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.47 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.63 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.50 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.91 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.32 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.22 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.77 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.46 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.44 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.49 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 2.10 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.22 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.47 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.31 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.45 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.83 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.34 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.94 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.51 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.07 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.09 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.87 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.35 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.39 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.65 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.38 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.45 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.44 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.97 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.48 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.75 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.17 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.08 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.85 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.51 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.90 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.68 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.21 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.15 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.95 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.12 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.01 | MC |