| SRR4457250 | 2nd_leaf | DAH4 | 0.91 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.55 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.01 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.81 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.70 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.06 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.16 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.08 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.77 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.94 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.76 | MC |
| SRR6320498 | carpel | wt | 2.63 | MC |
| SRR5560727 | caryopsis | wild_type | 4.27 | MC |
| SRR5560728 | caryopsis | wild_type | 3.51 | MC |
| SRR5560729 | caryopsis | wild_type | 1.66 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.69 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.44 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.39 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.92 | MC |
| SRR976168 | flag_leaf | wild_type | 0.80 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.80 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.18 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.35 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.38 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.91 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.65 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.22 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.70 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.41 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.46 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.12 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.13 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.02 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.21 | MC |
| SRR1213691 | flower | wt | 2.41 | MC |
| SRR8240825 | leaf | wild_type | 0.85 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.11 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.97 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.34 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.97 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.74 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.30 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.20 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.66 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.62 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.85 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.91 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.98 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.82 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.34 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.52 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.47 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.75 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.79 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.99 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.99 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.93 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.30 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.59 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.21 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.66 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.00 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.45 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.06 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.55 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.16 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.93 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.56 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.51 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.04 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.82 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.55 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.38 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.03 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.62 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.55 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.86 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.62 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.55 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.86 | MC |
| SRR1761529 | leaf | drought | 0.62 | MC |
| SRR1761530 | leaf | control | 1.55 | MC |
| SRR1761531 | leaf | control | 0.86 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.34 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.24 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.91 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.40 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.40 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.25 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.57 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.81 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.55 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.45 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.05 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.39 | MC |
| SRR1213693 | leaf | wt | 2.27 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.02 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.48 | MC |
| SRR6502088 | leaf | control | 2.38 | MC |
| SRR6502089 | leaf | control | 2.18 | MC |
| SRR6502090 | leaf | control | 1.98 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.89 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.19 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.66 | MC |
| SRR6502100 | leaf | control | 3.74 | MC |
| SRR6502101 | leaf | control | 3.11 | MC |
| SRR6502102 | leaf | control | 3.80 | MC |
| SRR5856936 | leaf | salt | 0.12 | MC |
| SRR5856937 | leaf | salt | 0.24 | MC |
| SRR5856938 | leaf | salt | 0.19 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.50 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.64 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.37 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 1.75 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.55 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.92 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.31 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 5.27 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.56 | MC |
| SRR8582888 | panicle | AM | 0.89 | MC |
| SRR8582889 | panicle | AM | 0.41 | MC |
| SRR8582890 | panicle | AM | 2.19 | MC |
| SRR5110429 | panicle | Dawn | 3.62 | MC |
| SRR5110431 | panicle | Dawn | 3.60 | MC |
| SRR5110432 | panicle | Dawn | 1.77 | MC |
| SRR4947496 | root | control | 3.25 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.55 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.97 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.93 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.43 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.04 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.59 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.81 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.00 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.36 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.94 | MC |
| SRR5110448 | panicle | Dusk | 4.72 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.00 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.42 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.29 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.40 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.37 | MC |
| SRR1633185 | panicle | WT | 0.98 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.37 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.65 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.10 | MC |
| SRR5126157 | root | "mock,7_days" | 0.75 | MC |
| SRR5126169 | root | "mock,14_days" | 0.47 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR1213695 | root | wt | 2.10 | MC |
| SRR4947480 | root | control | 3.61 | MC |
| SRR4947484 | root | Al | 2.79 | MC |
| SRR4947485 | root | Al | 4.38 | MC |
| SRR4947488 | root | control | 2.96 | MC |
| SRR4947489 | root | control | 3.40 | MC |
| SRR4947490 | root | Al | 0.48 | MC |
| SRR4947492 | root | Al | 3.57 | MC |
| SRR4947493 | root | Al | 3.17 | MC |
| SRR4947498 | root | Al | 1.06 | MC |
| SRR4947500 | root | Al | 4.35 | MC |
| SRR4947501 | root | Al | 6.16 | MC |
| SRR4947502 | root | control | 0.63 | MC |
| SRR4947503 | root | control | 0.52 | MC |
| SRR4947504 | root | control | 3.84 | MC |
| SRR4947505 | root | control | 5.50 | MC |
| SRR4947508 | root | Al | 3.29 | MC |
| SRR4947509 | root | Al | 5.06 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.34 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.40 | MC |
| SRR6441554 | seedling | wild_type | 0.43 | MC |
| SRR6441555 | seedling | wild_type | 1.27 | MC |
| SRR2154086 | seedling | wt | 2.40 | MC |
| SRR2154082 | seedling | wt | 1.48 | MC |
| SRR2154083 | seedling | wt | 1.46 | MC |
| SRR2154084 | seedling | wt | 1.85 | MC |
| SRR2154085 | seedling | wt | 0.92 | MC |
| SRR2154087 | seedling | wt | 2.35 | MC |
| SRR3098741 | seedling | wt | 2.74 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.16 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.49 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.54 | MC |
| SRR1944583 | seedling | no_treatment | 1.47 | MC |
| SRR358791 | seedling | wt | 4.19 | MC |
| SRR358792 | seedling | wt | 4.30 | MC |
| SRR358793 | seedling | wt | 1.39 | MC |
| SRR358794 | seedling | wt | 1.05 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.50 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.76 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.03 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.82 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.22 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.72 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.29 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.18 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.96 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.24 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.34 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.11 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.99 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.71 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.84 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.47 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.85 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.82 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.32 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.33 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.35 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.07 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.83 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.12 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.03 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.49 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.25 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.08 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.54 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.58 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.90 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.48 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.49 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.39 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.53 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.48 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.70 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.54 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.02 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.07 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.89 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.11 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.26 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.49 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 4.36 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.08 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.27 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.53 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.84 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.90 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.99 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.49 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.22 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.34 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.82 | MC |