| SRR4457249 | 2nd_leaf | DAH4 | 2.77 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.64 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.64 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.83 | MC |
| SRR6320473 | carpel | wt | 2.81 | MC |
| SRR6320498 | carpel | wt | 1.96 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.72 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.20 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.79 | MC |
| SRR4947495 | root | control | 2.02 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.37 | MC |
| SRR7265404 | coleoptile | 2dN | 0.52 | MC |
| SRR7265405 | coleoptile | 2dN | 0.31 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.50 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.80 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.74 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.19 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.76 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.44 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.73 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.95 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.50 | MC |
| SRR7265376 | embryo | 1hA | 0.80 | MC |
| SRR7265377 | embryo | 1hA | 0.59 | MC |
| SRR7265378 | embryo | 1hA | 0.80 | MC |
| SRR7265379 | embryo | 1hN | 1.45 | MC |
| SRR7265380 | embryo | 1hN | 0.75 | MC |
| SRR7265381 | embryo | 1hN | 0.82 | MC |
| SRR7265382 | embryo | 3hA | 0.84 | MC |
| SRR7265383 | embryo | 3hA | 0.80 | MC |
| SRR7265384 | embryo | 3hA | 0.58 | MC |
| SRR7265385 | embryo | 3hN | 0.63 | MC |
| SRR7265386 | embryo | 3hN | 1.11 | MC |
| SRR7265387 | embryo | 3hN | 0.66 | MC |
| SRR7265388 | embryo | 12hA | 0.47 | MC |
| SRR7265389 | embryo | 12hA | 0.57 | MC |
| SRR7265390 | embryo | 12hA | 0.42 | MC |
| SRR7265397 | embryo | 24hN | 0.51 | MC |
| SRR7265399 | embryo | 24hN | 0.74 | MC |
| SRR2338866 | endosprem | control | 2.08 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.72 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.12 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.17 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.22 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.12 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.45 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.92 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.98 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.67 | MC |
| SRR4457246 | flag_leaf | DAH44 | 4.20 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.93 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.57 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.28 | MC |
| SRR1213691 | flower | wt | 0.81 | MC |
| SRR8060835 | leaf | wild_type | 1.19 | MC |
| SRR8060836 | leaf | wild_type | 0.84 | MC |
| SRR8060837 | leaf | wild_type | 1.66 | MC |
| SRR8240824 | leaf | wild_type | 1.59 | MC |
| SRR8240825 | leaf | wild_type | 1.15 | MC |
| SRR8240826 | leaf | wild_type | 0.55 | MC |
| SRR8240818 | leaf | wild_type | 0.78 | MC |
| SRR8240819 | leaf | wild_type | 1.77 | MC |
| SRR8240820 | leaf | wild_type | 1.05 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.90 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.97 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.80 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.78 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.30 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.41 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.64 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.12 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.94 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.67 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.33 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.01 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.51 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.90 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.89 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.51 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.15 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.82 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.07 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.88 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.34 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.74 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.56 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.01 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.16 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.99 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.12 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.68 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.84 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.69 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.53 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.32 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.25 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.45 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.30 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.58 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.40 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.43 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.83 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.57 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.08 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.01 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.05 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.58 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.08 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.01 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.05 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.58 | MC |
| SRR1761528 | leaf | drought | 2.08 | MC |
| SRR1761529 | leaf | drought | 3.01 | MC |
| SRR1761530 | leaf | control | 1.05 | MC |
| SRR1761531 | leaf | control | 1.58 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.26 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.54 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.27 | MC |
| SRR6417967 | leaf | H2O_control | 2.21 | MC |
| SRR6417968 | leaf | H2O_control | 1.73 | MC |
| SRR6417969 | leaf | H2O_control | 1.28 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 3.05 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.74 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.40 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.22 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.85 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.39 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.16 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.04 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.66 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.05 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.17 | MC |
| SRR1213692 | leaf | wt | 1.22 | MC |
| SRR1213693 | leaf | wt | 0.46 | MC |
| SRR6502088 | leaf | control | 2.54 | MC |
| SRR6502089 | leaf | control | 1.57 | MC |
| SRR6502090 | leaf | control | 3.61 | MC |
| SRR6502100 | leaf | control | 2.24 | MC |
| SRR6502101 | leaf | control | 2.33 | MC |
| SRR6502102 | leaf | control | 2.11 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.39 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.46 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.19 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.44 | MC |
| SRR8582888 | panicle | AM | 1.90 | MC |
| SRR8582890 | panicle | AM | 1.19 | MC |
| SRR8582891 | panicle | PM | 1.59 | MC |
| SRR8582892 | panicle | PM | 1.48 | MC |
| SRR8582893 | panicle | PM | 1.83 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.12 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.94 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.89 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.81 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.48 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.52 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.84 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.74 | MC |
| SRR5110445 | panicle | Dusk | 3.11 | MC |
| SRR5110448 | panicle | Dusk | 4.57 | MC |
| SRR5110449 | panicle | Dawn + 14h | 5.96 | MC |
| SRR5110452 | panicle | Dawn + 14h | 5.45 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.32 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.41 | MC |
| SRR1213695 | root | wt | 0.91 | MC |
| SRR4947478 | root | control | 2.77 | MC |
| SRR4947479 | root | control | 1.86 | MC |
| SRR4947482 | root | Al | 0.82 | MC |
| SRR4947483 | root | Al | 1.31 | MC |
| SRR4947487 | root | control | 2.02 | MC |
| SRR4947490 | root | Al | 2.20 | MC |
| SRR4947491 | root | Al | 2.76 | MC |
| SRR4947494 | root | control | 2.34 | MC |
| SRR4947498 | root | Al | 2.23 | MC |
| SRR4947499 | root | Al | 1.76 | MC |
| SRR4947502 | root | control | 1.32 | MC |
| SRR4947503 | root | control | 2.03 | MC |
| SRR4947506 | root | Al | 2.73 | MC |
| SRR4947507 | root | Al | 1.21 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.26 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.45 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.98 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.18 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.20 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.93 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.04 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.27 | MC |
| SRR6441554 | seedling | wild_type | 1.55 | MC |
| SRR6441555 | seedling | wild_type | 1.61 | MC |
| SRR2154086 | seedling | wt | 3.47 | MC |
| SRR2154082 | seedling | wt | 3.34 | MC |
| SRR2154083 | seedling | wt | 2.13 | MC |
| SRR2154084 | seedling | wt | 2.85 | MC |
| SRR2154085 | seedling | wt | 3.64 | MC |
| SRR3098741 | seedling | wt | 1.40 | MC |
| SRR3098742 | seedling | wt | 1.84 | MC |
| SRR3098743 | seedling | wt | 1.42 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.71 | MC |
| SRR1944583 | seedling | no_treatment | 2.64 | MC |
| SRR358791 | seedling | wt | 0.86 | MC |
| SRR358792 | seedling | wt | 1.92 | MC |
| SRR358793 | seedling | wt | 1.04 | MC |
| SRR358794 | seedling | wt | 1.08 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.62 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.97 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.26 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.30 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.48 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.55 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.81 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.48 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.28 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.52 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.54 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.64 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.37 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.03 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.92 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.08 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.95 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.77 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.16 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.79 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.63 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.97 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.93 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.44 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.29 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.15 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.70 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.22 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.48 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 6.56 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.76 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.18 | MC |