| SRR4457260 | 2nd_leaf | DAH28 | 0.35 | MC |
| SRR5560727 | caryopsis | wild_type | 0.47 | MC |
| SRR5560729 | caryopsis | wild_type | 0.74 | MC |
| SRR7265402 | coleoptile | 2dA | 2.69 | MC |
| SRR7265403 | coleoptile | 2dN | 2.65 | MC |
| SRR7265404 | coleoptile | 2dN | 1.83 | MC |
| SRR7265405 | coleoptile | 2dN | 2.44 | MC |
| SRR7265406 | coleoptile | 3dA | 2.63 | MC |
| SRR7265407 | coleoptile | 3dA | 2.52 | MC |
| SRR7265408 | coleoptile | 3dA | 2.61 | MC |
| SRR7265409 | coleoptile | 3dN | 2.10 | MC |
| SRR7265410 | coleoptile | 3dN | 1.74 | MC |
| SRR7265411 | coleoptile | 3dN | 1.47 | MC |
| SRR7265413 | coleoptile | 4dA | 1.71 | MC |
| SRR7265414 | coleoptile | 4dA | 1.71 | MC |
| SRR7265415 | coleoptile | 4dN | 1.73 | MC |
| SRR7265416 | coleoptile | 4dN | 1.38 | MC |
| SRR7265417 | coleoptile | 4dN | 1.36 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.55 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.19 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.63 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.52 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.41 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.89 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.57 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.35 | MC |
| SRR7265377 | embryo | 1hA | 3.45 | MC |
| SRR7265382 | embryo | 3hA | 2.57 | MC |
| SRR7265383 | embryo | 3hA | 2.40 | MC |
| SRR7265384 | embryo | 3hA | 1.77 | MC |
| SRR7265385 | embryo | 3hN | 2.51 | MC |
| SRR7265388 | embryo | 12hA | 3.78 | MC |
| SRR7265389 | embryo | 12hA | 4.41 | MC |
| SRR7265390 | embryo | 12hA | 3.88 | MC |
| SRR7265391 | embryo | 12hN | 3.19 | MC |
| SRR7265392 | embryo | 12hN | 1.87 | MC |
| SRR7265393 | embryo | 12hN | 1.71 | MC |
| SRR7265394 | embryo | 24hA | 4.56 | MC |
| SRR7265395 | embryo | 24hA | 2.78 | MC |
| SRR7265396 | embryo | 24hA | 4.04 | MC |
| SRR7265397 | embryo | 24hN | 3.11 | MC |
| SRR7265398 | embryo | 24hN | 2.45 | MC |
| SRR7265399 | embryo | 24hN | 3.06 | MC |
| SRR2338868 | endosprem | high_temperature | 0.68 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.38 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.60 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.46 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.04 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.55 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.38 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.37 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.60 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.75 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.64 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.55 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.25 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.20 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.04 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.61 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.49 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.78 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.58 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.38 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.39 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.13 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.71 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.68 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.37 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.75 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.01 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.16 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.39 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.12 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.57 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.15 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.39 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.12 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.57 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.15 | MC |
| SRR1761528 | leaf | drought | 2.39 | MC |
| SRR1761529 | leaf | drought | 1.12 | MC |
| SRR1761530 | leaf | control | 1.57 | MC |
| SRR1761531 | leaf | control | 1.15 | MC |
| SRR504365 | leaf | wt | 3.87 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.08 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.70 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.48 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.58 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.72 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.80 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.05 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.34 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.65 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.04 | MC |
| SRR1213692 | leaf | wt | 0.80 | MC |
| SRR1213693 | leaf | wt | 1.17 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.55 | MC |
| SRR6502089 | leaf | control | 2.65 | MC |
| SRR6502090 | leaf | control | 3.31 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.02 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.22 | MC |
| SRR6502101 | leaf | control | 3.34 | MC |
| SRR6502102 | leaf | control | 2.85 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.55 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.48 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.78 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.68 | MC |
| SRR6168974 | leaf | none (control) | 0.53 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.17 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.72 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.34 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.20 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.57 | MC |
| SRR8582891 | panicle | PM | 0.77 | MC |
| SRR4947496 | root | control | 2.97 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.77 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.07 | MC |
| SRR1633182 | panicle | WT | 2.97 | MC |
| SRR1633185 | panicle | WT | 3.13 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.51 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.40 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.67 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.24 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.39 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.11 | MC |
| SRR5126147 | root | "mock,1_day" | 1.14 | MC |
| SRR5126148 | root | "mock,1_day" | 1.43 | MC |
| SRR5126149 | root | "mock,1_day" | 2.00 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.89 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.42 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.74 | MC |
| SRR5126153 | root | "mock,7_days" | 1.74 | MC |
| SRR5126155 | root | "mock,7_days" | 1.24 | MC |
| SRR5126157 | root | "mock,7_days" | 1.34 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.10 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.77 | MC |
| SRR5126165 | root | "mock,14_days" | 1.37 | MC |
| SRR5126167 | root | "mock,14_days" | 1.07 | MC |
| SRR5126169 | root | "mock,14_days" | 1.50 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.52 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.97 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.86 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.94 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.42 | MC |
| SRR1213694 | root | wt | 3.00 | MC |
| SRR1213695 | root | wt | 1.42 | MC |
| SRR4947481 | root | control | 3.22 | MC |
| SRR4947484 | root | Al | 2.90 | MC |
| SRR4947485 | root | Al | 4.95 | MC |
| SRR4947488 | root | control | 3.53 | MC |
| SRR4947489 | root | control | 3.09 | MC |
| SRR4947492 | root | Al | 4.45 | MC |
| SRR4947497 | root | control | 4.89 | MC |
| SRR4947500 | root | Al | 4.80 | MC |
| SRR4947501 | root | Al | 2.94 | MC |
| SRR4947504 | root | control | 4.71 | MC |
| SRR4947505 | root | control | 5.11 | MC |
| SRR4947508 | root | Al | 4.29 | MC |
| SRR4947509 | root | Al | 4.28 | MC |
| SRR2154086 | seedling | wt | 0.62 | MC |
| SRR2154083 | seedling | wt | 2.34 | MC |
| SRR2154085 | seedling | wt | 2.27 | MC |
| SRR358791 | seedling | wt | 1.49 | MC |
| SRR358793 | seedling | wt | 1.97 | MC |
| SRR358794 | seedling | wt | 2.34 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.64 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.65 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.26 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.69 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.84 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.49 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.81 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.08 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.13 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.34 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.37 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.41 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.98 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.25 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.15 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.41 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.76 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.65 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.25 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.76 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.15 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.15 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.96 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.72 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.52 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.14 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.64 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.55 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.98 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.54 | MC |