| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.92 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.35 | MC |
| SRR7265407 | coleoptile | 3dA | 0.49 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.74 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.04 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.50 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.29 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.99 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.55 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.83 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.66 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.29 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.99 | MC |
| SRR2338868 | endosprem | high_temperature | 1.37 | MC |
| SRR2338869 | endosprem | high_temperature | 1.43 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.93 | MC |
| SRR5856928 | leaf | control | 0.73 | MC |
| SRR5856930 | leaf | salt | 0.27 | MC |
| SRR5856931 | leaf | salt | 0.25 | MC |
| SRR5856935 | leaf | control | 0.26 | MC |
| SRR5856938 | leaf | salt | 0.42 | MC |
| SRR6168975 | leaf | none (control) | 2.31 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.60 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.90 | MC |
| SRR6168981 | leaf | none (control) | 0.39 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.40 | MC |
| SRR8582891 | panicle | PM | 3.76 | MC |
| SRR8582892 | panicle | PM | 3.64 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.10 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.33 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.09 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.48 | MC |
| SRR5126147 | root | "mock,1_day" | 1.01 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.15 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.92 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.04 | MC |
| SRR5126153 | root | "mock,7_days" | 0.31 | MC |
| SRR5126155 | root | "mock,7_days" | 1.47 | MC |
| SRR5126157 | root | "mock,7_days" | 2.98 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.44 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.08 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.58 | MC |
| SRR5126165 | root | "mock,14_days" | 1.15 | MC |
| SRR5126167 | root | "mock,14_days" | 1.82 | MC |
| SRR5126169 | root | "mock,14_days" | 1.14 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.11 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.41 | MC |
| SRR4947485 | root | Al | 0.53 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.60 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.04 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.09 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.45 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.88 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.71 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.10 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.85 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.31 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.57 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.29 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.39 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.88 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.55 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.02 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.43 | MC |