| SRR3745125 | anther | wt | 0.83 | MC |
| SRR3745126 | anther | wt | 1.17 | MC |
| SRR3745127 | anther | wt | 0.87 | MC |
| SRR358797 | callus | wt | 1.18 | MC |
| SRR5560727 | caryopsis | wild_type | 0.27 | MC |
| SRR5560729 | caryopsis | wild_type | 0.45 | MC |
| SRR7265404 | coleoptile | 2dN | 0.29 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.39 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.51 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.52 | MC |
| SRR7265381 | embryo | 1hN | 0.33 | MC |
| SRR7265386 | embryo | 3hN | 0.30 | MC |
| SRR7265388 | embryo | 12hA | 0.56 | MC |
| SRR7265389 | embryo | 12hA | 0.83 | MC |
| SRR7265390 | embryo | 12hA | 0.45 | MC |
| SRR7265391 | embryo | 12hN | 0.48 | MC |
| SRR7265392 | embryo | 12hN | 0.57 | MC |
| SRR7265393 | embryo | 12hN | 0.70 | MC |
| SRR7265398 | embryo | 24hN | 0.46 | MC |
| SRR7265399 | embryo | 24hN | 0.43 | MC |
| SRR2338866 | endosprem | control | 1.35 | MC |
| SRR2338867 | endosprem | control | 0.55 | MC |
| SRR2338869 | endosprem | high_temperature | 0.76 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.88 | MC |
| SRR1213691 | flower | wt | 0.83 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.38 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.29 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.51 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.41 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.22 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.35 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.42 | MC |
| SRR6502088 | leaf | control | 0.40 | MC |
| SRR6502089 | leaf | control | 0.34 | MC |
| SRR6502090 | leaf | control | 0.31 | MC |
| SRR6502100 | leaf | control | 0.37 | MC |
| SRR6502101 | leaf | control | 0.38 | MC |
| SRR5856927 | leaf | control | 1.19 | MC |
| SRR5856928 | leaf | control | 1.23 | MC |
| SRR5856929 | leaf | control | 2.05 | MC |
| SRR5856930 | leaf | salt | 0.76 | MC |
| SRR5856931 | leaf | salt | 0.54 | MC |
| SRR5856932 | leaf | salt | 0.50 | MC |
| SRR5856933 | leaf | control | 1.60 | MC |
| SRR5856934 | leaf | control | 1.07 | MC |
| SRR5856935 | leaf | control | 1.39 | MC |
| SRR5856936 | leaf | salt | 0.65 | MC |
| SRR5856937 | leaf | salt | 0.73 | MC |
| SRR5856938 | leaf | salt | 0.63 | MC |
| SRR5110432 | panicle | Dawn | 0.80 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.45 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.60 | MC |
| SRR5110446 | panicle | Dusk | 0.49 | MC |
| SRR5110447 | panicle | Dusk | 0.57 | MC |
| SRR5110448 | panicle | Dusk | 0.52 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.46 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.58 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.51 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.01 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.05 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.22 | MC |
| SRR5126147 | root | "mock,1_day" | 0.72 | MC |
| SRR5126148 | root | "mock,1_day" | 0.76 | MC |
| SRR5126149 | root | "mock,1_day" | 0.57 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.01 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.59 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.75 | MC |
| SRR5126153 | root | "mock,7_days" | 0.38 | MC |
| SRR5126157 | root | "mock,7_days" | 0.38 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.86 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.72 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.38 | MC |
| SRR5126167 | root | "mock,14_days" | 0.27 | MC |
| SRR5126169 | root | "mock,14_days" | 0.74 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.58 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.69 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.32 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.62 | MC |
| SRR4947493 | root | Al | 0.52 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.35 | MC |
| SRR6502095 | root | control | 0.38 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.34 | MC |
| SRR6502106 | root | control | 0.55 | MC |
| SRR6502107 | root | control | 0.26 | MC |
| SRR6502108 | root | control | 0.35 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.45 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.34 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.53 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.25 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.22 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.39 | MC |
| SRR358791 | seedling | wt | 0.65 | MC |
| SRR358793 | seedling | wt | 0.77 | MC |
| SRR358794 | seedling | wt | 0.82 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.36 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.61 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.05 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.20 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.03 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.28 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.67 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.99 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.30 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.38 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.39 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.39 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.32 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.28 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.47 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.14 | MC |