| SRR1740429 | root_meristematic_zone | wt | 0.07 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.00 | LC |
| SRR6168981 | leaf | none (control) | 0.08 | LC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.04 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.17 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.00 | LC |
| SRR3209780 | leaf | Drought;Short_Day | 0.00 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.13 | LC |
| SRR6417968 | leaf | H2O_control | 0.19 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.28 | LC |
| SRR6417967 | leaf | H2O_control | 0.00 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.08 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.24 | LC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.00 | LC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.00 | LC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.00 | LC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.00 | LC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.00 | LC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.00 | LC |
| SRR6168980 | leaf | none (control) | 0.02 | LC |
| SRR6502088 | leaf | control | 0.28 | LC |
| SRR6502089 | leaf | control | 0.24 | LC |
| SRR7265408 | coleoptile | 3dA | 0.00 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.15 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.11 | LC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.05 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.00 | LC |
| SRR358798 | callus | wt | 0.00 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR358797 | callus | wt | 0.00 | LC |
| SRR358794 | seedling | wt | 0.00 | LC |
| SRR358795 | callus | wt | 0.00 | LC |
| SRR358792 | seedling | wt | 0.00 | LC |
| SRR358793 | seedling | wt | 0.00 | LC |
| SRR358791 | seedling | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.33 | LC |
| SRR6502106 | root | control | 0.00 | LC |
| SRR6502101 | leaf | control | 0.12 | LC |
| SRR6502100 | leaf | control | 0.21 | LC |
| SRR2338867 | endosprem | control | 0.28 | LC |
| SRR2338866 | endosprem | control | 0.91 | LC |
| SRR3209777 | leaf | Watered;Long_Day | 0.09 | LC |
| SRR3209776 | leaf | Drought;Short_Day | 0.05 | LC |
| SRR3209775 | leaf | Drought;Short_Day | 0.00 | LC |
| SRR3209772 | leaf | Drought;Long_Day | 0.15 | LC |
| SRR3209771 | leaf | Drought;Long_Day | 0.00 | LC |
| SRR3209770 | leaf | Watered;Long_Day | 0.17 | LC |
| SRR3209779 | leaf | Watered;Short_Day | 0.00 | LC |
| SRR3209778 | leaf | Drought;Long_Day | 0.20 | LC |
| SRR5856932 | leaf | salt | 0.09 | LC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.00 | LC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.00 | LC |
| SRR6502085 | leaf | 100 mM NaCl | 0.07 | LC |
| SRR6502086 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR6502087 | leaf | 100 mM NaCl | 0.23 | LC |
| SRR8611900 | leaf | Non-inoculated | 0.19 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.00 | LC |
| SRR7265381 | embryo | 1hN | 0.21 | LC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.19 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.03 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.00 | LC |
| SRR1761531 | leaf | control | 0.41 | LC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.00 | LC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.00 | LC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.00 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 0.00 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 0.00 | LC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 0.00 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 0.00 | LC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.75 | LC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617554 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR6320473 | carpel | wt | 0.52 | LC |
| SRR5110459 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.09 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265374 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265377 | embryo | 1hA | 0.12 | LC |
| SRR7265373 | embryo | dry seed 0 h | 0.00 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.05 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.00 | LC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 0.00 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.00 | LC |
| SRR8611902 | leaf | Non-inoculated | 0.10 | LC |
| SRR8611901 | leaf | Non-inoculated | 0.20 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.29 | LC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.41 | LC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 0.00 | LC |
| SRR6502090 | leaf | control | 0.07 | LC |
| SRR6502097 | leaf | 100 mM NaCl | 0.30 | LC |
| SRR6502095 | root | control | 0.29 | LC |
| SRR6502098 | leaf | 100 mM NaCl | 0.36 | LC |
| SRR8240825 | leaf | wild_type | 0.05 | LC |
| SRR8240824 | leaf | wild_type | 0.00 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.80 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR8240820 | leaf | wild_type | 0.05 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.05 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.06 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.21 | LC |
| SRR4457237 | flag_leaf | DAH20 | 0.02 | LC |
| SRR1761529 | leaf | drought | 0.41 | LC |
| SRR1761528 | leaf | drought | 0.00 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR6168979 | leaf | none (control) | 0.02 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.27 | LC |
| SRR1944583 | seedling | no_treatment | 0.00 | LC |
| SRR1633182 | panicle | WT | 0.00 | LC |
| SRR8240826 | leaf | wild_type | 0.00 | LC |
| SRR1633185 | panicle | WT | 0.00 | LC |
| SRR8060835 | leaf | wild_type | 0.11 | LC |
| SRR8060836 | leaf | wild_type | 0.12 | LC |
| SRR8060837 | leaf | wild_type | 0.09 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 0.00 | LC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 0.00 | LC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 0.00 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 0.14 | LC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 0.00 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 0.00 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.12 | LC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.12 | LC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.41 | LC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.41 | LC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.41 | LC |
| SRR2857721 | seedling | drought_stress_6h | 0.04 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.00 | LC |
| SRR7265419 | coleoptile | 3dN1dA | 0.45 | LC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.00 | LC |