| SRR1740429 | root_meristematic_zone | wt | 0.15 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.00 | LC |
| SRR3209769 | leaf | Watered;Long_Day | 0.19 | LC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.09 | LC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR5856928 | leaf | control | 0.04 | LC |
| SRR5856929 | leaf | control | 0.14 | LC |
| SRR5856927 | leaf | control | 0.12 | LC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.29 | LC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.23 | LC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.27 | LC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110432 | panicle | Dawn | 0.39 | LC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.15 | LC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.27 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.20 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.00 | LC |
| SRR3745125 | anther | wt | 0.00 | LC |
| SRR3745126 | anther | wt | 0.00 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.30 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.28 | LC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.15 | LC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.06 | LC |
| SRR4947506 | root | Al | 0.17 | LC |
| SRR8582888 | panicle | AM | 0.09 | LC |
| SRR8582889 | panicle | AM | 0.10 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.32 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.21 | LC |
| SRR6502088 | leaf | control | 0.26 | LC |
| SRR7265406 | coleoptile | 3dA | 0.26 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.31 | LC |
| SRR5110440 | panicle | Dawn + 7h | 0.00 | LC |
| SRR4947478 | root | control | 0.00 | LC |
| SRR4947479 | root | control | 0.00 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR358797 | callus | wt | 0.45 | LC |
| SRR358795 | callus | wt | 0.00 | LC |
| SRR358792 | seedling | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.00 | LC |
| SRR2338868 | endosprem | high_temperature | 0.29 | LC |
| SRR6502108 | root | control | 0.00 | LC |
| SRR6502105 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502107 | root | control | 0.00 | LC |
| SRR6502106 | root | control | 0.00 | LC |
| SRR6502101 | leaf | control | 0.24 | LC |
| SRR6502100 | leaf | control | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.00 | LC |
| SRR2338866 | endosprem | control | 0.00 | LC |
| SRR3209770 | leaf | Watered;Long_Day | 0.20 | LC |
| SRR5856931 | leaf | salt | 0.00 | LC |
| SRR5856930 | leaf | salt | 0.00 | LC |
| SRR5856932 | leaf | salt | 0.07 | LC |
| SRR5856937 | leaf | salt | 0.03 | LC |
| SRR5856936 | leaf | salt | 0.06 | LC |
| SRR4947499 | root | Al | 0.41 | LC |
| SRR4947490 | root | Al | 0.43 | LC |
| SRR4947494 | root | control | 0.45 | LC |
| SRR4947495 | root | control | 0.25 | LC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.18 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.35 | LC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.23 | LC |
| SRR5126167 | root | "mock,14_days" | 0.18 | LC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.31 | LC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.10 | LC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.17 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.19 | LC |
| SRR7265380 | embryo | 1hN | 0.22 | LC |
| SRR7265383 | embryo | 3hA | 0.23 | LC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.12 | LC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.26 | LC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.16 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.32 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.31 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 0.56 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.32 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.51 | LC |
| SRR2154084 | seedling | wt | 0.21 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617554 | shoot_apical_meristem | no collect | 0.46 | LC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.00 | LC |
| SRR6320473 | carpel | wt | 0.00 | LC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR7265377 | embryo | 1hA | 0.21 | LC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 2.83 | LC |
| SRR4947482 | root | Al | 0.13 | LC |
| SRR4947487 | root | control | 0.00 | LC |
| SRR6502092 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502097 | leaf | 100 mM NaCl | 0.34 | LC |
| SRR6502096 | root | control | 0.00 | LC |
| SRR6502095 | root | control | 0.25 | LC |
| SRR6502094 | root | control | 0.00 | LC |
| SRR6502099 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR6502098 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR7265395 | embryo | 24hA | 0.31 | LC |
| SRR8240825 | leaf | wild_type | 0.10 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.83 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR3745127 | anther | wt | 0.24 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.18 | LC |
| SRR1740436 | root_differentiation_zone | wt | 0.19 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.00 | LC |
| SRR1944583 | seedling | no_treatment | 0.28 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.00 | LC |
| SRR8060836 | leaf | wild_type | 0.21 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.37 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502102 | leaf | control | 0.00 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 3.16 | LC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 2.85 | LC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 0.00 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 1.82 | LC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 0.66 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 1.59 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.12 | LC |
| SRR6320498 | carpel | wt | 0.00 | LC |
| SRR976168 | flag_leaf | wild_type | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.02 | LC |
| SRR5126149 | root | "mock,1_day" | 0.12 | LC |
| SRR5126147 | root | "mock,1_day" | 0.19 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.22 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.53 | LC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.00 | LC |