| SRR1740429 | root_meristematic_zone | wt | 0.16 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.21 | LC |
| SRR5856927 | leaf | control | 0.13 | LC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.15 | LC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.09 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.06 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.14 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.08 | LC |
| SRR3745125 | anther | wt | 0.19 | LC |
| SRR6417968 | leaf | H2O_control | 0.05 | LC |
| SRR6417969 | leaf | H2O_control | 0.09 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.05 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.10 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.09 | LC |
| SRR4947508 | root | Al | 0.05 | LC |
| SRR4947509 | root | Al | 0.14 | LC |
| SRR4947500 | root | Al | 0.08 | LC |
| SRR4947501 | root | Al | 0.18 | LC |
| SRR4947502 | root | control | 0.16 | LC |
| SRR4947503 | root | control | 0.09 | LC |
| SRR4947504 | root | control | 0.02 | LC |
| SRR4947505 | root | control | 0.03 | LC |
| SRR4947506 | root | Al | 0.08 | LC |
| SRR4947507 | root | Al | 0.27 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.12 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.15 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.09 | LC |
| SRR5126157 | root | "mock,7_days" | 0.15 | LC |
| SRR5126155 | root | "mock,7_days" | 0.13 | LC |
| SRR4947478 | root | control | 0.07 | LC |
| SRR4947479 | root | control | 0.03 | LC |
| SRR358798 | callus | wt | 0.26 | LC |
| SRR358796 | callus | wt | 0.33 | LC |
| SRR358797 | callus | wt | 0.20 | LC |
| SRR358795 | callus | wt | 0.35 | LC |
| SRR6502108 | root | control | 0.10 | LC |
| SRR6502105 | root | 100 mM NaCl | 0.07 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.13 | LC |
| SRR6502106 | root | control | 0.19 | LC |
| SRR5278375 | pistil | "Balilla,S1" | 0.06 | LC |
| SRR5278374 | pistil | "Balilla,S1" | 0.06 | LC |
| SRR5278377 | pistil | "Balilla,S2" | 0.06 | LC |
| SRR5278376 | pistil | "Balilla,S2" | 0.06 | LC |
| SRR5856930 | leaf | salt | 0.13 | LC |
| SRR5278379 | pistil | "Balilla,S3" | 0.03 | LC |
| SRR5278378 | pistil | "Balilla,S3" | 0.10 | LC |
| SRR4947498 | root | Al | 0.14 | LC |
| SRR4947499 | root | Al | 0.10 | LC |
| SRR4947492 | root | Al | 0.03 | LC |
| SRR4947493 | root | Al | 0.04 | LC |
| SRR4947490 | root | Al | 0.04 | LC |
| SRR4947491 | root | Al | 0.08 | LC |
| SRR4947496 | root | control | 0.05 | LC |
| SRR4947497 | root | control | 0.12 | LC |
| SRR4947494 | root | control | 0.12 | LC |
| SRR4947495 | root | control | 0.06 | LC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.34 | LC |
| SRR5126169 | root | "mock,14_days" | 0.16 | LC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.32 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.21 | LC |
| SRR5126167 | root | "mock,14_days" | 0.14 | LC |
| SRR5126165 | root | "mock,14_days" | 0.18 | LC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.03 | LC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.12 | LC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.02 | LC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.02 | LC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.05 | LC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.08 | LC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.12 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.09 | LC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.04 | LC |
| SRR1213694 | root | wt | 0.16 | LC |
| SRR4947489 | root | control | 0.01 | LC |
| SRR4947488 | root | control | 0.04 | LC |
| SRR4947481 | root | control | 0.04 | LC |
| SRR4947480 | root | control | 0.04 | LC |
| SRR4947483 | root | Al | 0.04 | LC |
| SRR4947482 | root | Al | 0.14 | LC |
| SRR4947485 | root | Al | 0.05 | LC |
| SRR4947484 | root | Al | 0.25 | LC |
| SRR4947487 | root | control | 0.00 | LC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 0.32 | LC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.20 | LC |
| SRR6502093 | root | 100 mM NaCl | 0.08 | LC |
| SRR6502092 | root | 100 mM NaCl | 0.08 | LC |
| SRR6502091 | root | 100 mM NaCl | 0.08 | LC |
| SRR6502096 | root | control | 0.08 | LC |
| SRR6502095 | root | control | 0.10 | LC |
| SRR6502094 | root | control | 0.08 | LC |
| SRR3745127 | anther | wt | 0.41 | LC |
| SRR1740436 | root_differentiation_zone | wt | 0.21 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.09 | LC |
| SRR1740432 | root_elongation_zone | wt | 0.21 | LC |
| SRR1740433 | root_elongation_zone | wt | 0.17 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.09 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.09 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.09 | LC |
| SRR6320498 | carpel | wt | 0.72 | LC |
| SRR5126148 | root | "mock,1_day" | 0.21 | LC |
| SRR5126149 | root | "mock,1_day" | 0.20 | LC |
| SRR5126147 | root | "mock,1_day" | 0.12 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.03 | LC |