| SRR1740429 | root_meristematic_zone | wt | 0.20 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.00 | LC |
| SRR3209769 | leaf | Watered;Long_Day | 0.19 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.18 | LC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.26 | LC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.33 | LC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.08 | LC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.09 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.00 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.15 | LC |
| SRR3745125 | anther | wt | 0.00 | LC |
| SRR3745126 | anther | wt | 0.00 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.13 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.22 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.19 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.00 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.06 | LC |
| SRR4947508 | root | Al | 0.22 | LC |
| SRR4947509 | root | Al | 0.20 | LC |
| SRR4947500 | root | Al | 0.00 | LC |
| SRR4947501 | root | Al | 0.00 | LC |
| SRR4947504 | root | control | 0.38 | LC |
| SRR4947505 | root | control | 0.38 | LC |
| SRR5126153 | root | "mock,7_days" | 0.00 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.13 | LC |
| SRR5126157 | root | "mock,7_days" | 0.29 | LC |
| SRR5126155 | root | "mock,7_days" | 0.10 | LC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.34 | LC |
| SRR7265408 | coleoptile | 3dA | 0.24 | LC |
| SRR7265400 | coleoptile | 2dA | 0.19 | LC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.35 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.49 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.09 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.00 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.00 | LC |
| SRR6502108 | root | control | 0.00 | LC |
| SRR6502105 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.14 | LC |
| SRR6502107 | root | control | 0.00 | LC |
| SRR6502106 | root | control | 0.00 | LC |
| SRR6502100 | leaf | control | 0.26 | LC |
| SRR2338867 | endosprem | control | 0.00 | LC |
| SRR2338866 | endosprem | control | 0.00 | LC |
| SRR3209774 | leaf | Watered;Short_Day | 0.11 | LC |
| SRR3209778 | leaf | Drought;Long_Day | 0.18 | LC |
| SRR4947492 | root | Al | 0.00 | LC |
| SRR4947493 | root | Al | 0.00 | LC |
| SRR4947496 | root | control | 0.00 | LC |
| SRR4947497 | root | control | 0.23 | LC |
| SRR4947494 | root | control | 0.45 | LC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.00 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.09 | LC |
| SRR5126165 | root | "mock,14_days" | 0.00 | LC |
| SRR6502085 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR7265389 | embryo | 12hA | 0.00 | LC |
| SRR7265384 | embryo | 3hA | 0.00 | LC |
| SRR7265385 | embryo | 3hN | 0.00 | LC |
| SRR7265386 | embryo | 3hN | 0.09 | LC |
| SRR7265387 | embryo | 3hN | 0.18 | LC |
| SRR7265380 | embryo | 1hN | 0.16 | LC |
| SRR7265382 | embryo | 3hA | 0.00 | LC |
| SRR7265383 | embryo | 3hA | 0.16 | LC |
| SRR1761530 | leaf | control | 0.00 | LC |
| SRR1761531 | leaf | control | 0.41 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.65 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.56 | LC |
| SRR7265379 | embryo | 1hN | 0.10 | LC |
| SRR7265378 | embryo | 1hA | 0.00 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265374 | embryo | dry seed 0 h | 0.16 | LC |
| SRR7265377 | embryo | 1hA | 0.15 | LC |
| SRR7265376 | embryo | 1hA | 0.14 | LC |
| SRR7265373 | embryo | dry seed 0 h | 0.00 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457244 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457243 | flag_leaf | DAH36 | 0.13 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.08 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.00 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.57 | LC |
| SRR1213694 | root | wt | 0.17 | LC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.00 | LC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.00 | LC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.41 | LC |
| SRR4947489 | root | control | 0.20 | LC |
| SRR4947488 | root | control | 0.00 | LC |
| SRR4947481 | root | control | 0.37 | LC |
| SRR4947480 | root | control | 0.00 | LC |
| SRR4947483 | root | Al | 0.37 | LC |
| SRR4947482 | root | Al | 0.00 | LC |
| SRR4947485 | root | Al | 0.18 | LC |
| SRR4947484 | root | Al | 0.00 | LC |
| SRR6502093 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502092 | root | 100 mM NaCl | 0.10 | LC |
| SRR6502091 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502096 | root | control | 0.00 | LC |
| SRR6502095 | root | control | 0.00 | LC |
| SRR6502094 | root | control | 0.00 | LC |
| SRR6502098 | leaf | 100 mM NaCl | 0.17 | LC |
| SRR7265392 | embryo | 12hN | 0.25 | LC |
| SRR7265390 | embryo | 12hA | 0.12 | LC |
| SRR7265396 | embryo | 24hA | 0.44 | LC |
| SRR7265394 | embryo | 24hA | 0.21 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457234 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.19 | LC |
| SRR4457236 | flag_leaf | DAH12 | 0.12 | LC |
| SRR4457237 | flag_leaf | DAH20 | 0.06 | LC |
| SRR4457231 | flag_leaf | DAH4 | 0.08 | LC |
| SRR4457232 | flag_leaf | DAH4 | 0.13 | LC |
| SRR1761529 | leaf | drought | 0.38 | LC |
| SRR1761528 | leaf | drought | 0.00 | LC |
| SRR3745127 | anther | wt | 0.00 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.20 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR1740436 | root_differentiation_zone | wt | 0.08 | LC |
| SRR6168979 | leaf | none (control) | 0.10 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.19 | LC |
| SRR1740432 | root_elongation_zone | wt | 0.00 | LC |
| SRR1740433 | root_elongation_zone | wt | 0.00 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.00 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.40 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.00 | LC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.38 | LC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.38 | LC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.41 | LC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.00 | LC |
| SRR2857719 | seedling | drought_stress_0h | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.21 | LC |
| SRR5126149 | root | "mock,1_day" | 0.00 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.38 | LC |
| SRR5126147 | root | "mock,1_day" | 0.11 | LC |
| SRR7265414 | coleoptile | 4dA | 0.00 | LC |
| SRR7265412 | coleoptile | 4dA | 0.38 | LC |
| SRR7265413 | coleoptile | 4dA | 0.00 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.00 | LC |
| SRR7265418 | coleoptile | 3dN1dA | 0.34 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.00 | LC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.33 | LC |