| SRR6168981 | leaf | none (control) | 0.01 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.05 | LC |
| SRR5856928 | leaf | control | 0.06 | LC |
| SRR5856929 | leaf | control | 0.12 | LC |
| SRR5856927 | leaf | control | 0.15 | LC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.25 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.03 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.03 | LC |
| SRR4947508 | root | Al | 0.02 | LC |
| SRR4947509 | root | Al | 0.22 | LC |
| SRR4947500 | root | Al | 0.20 | LC |
| SRR4947501 | root | Al | 0.43 | LC |
| SRR4947502 | root | control | 0.14 | LC |
| SRR4947503 | root | control | 0.21 | LC |
| SRR4947504 | root | control | 0.00 | LC |
| SRR4947505 | root | control | 0.22 | LC |
| SRR4947506 | root | Al | 0.06 | LC |
| SRR4947507 | root | Al | 0.30 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.11 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.02 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.13 | LC |
| SRR5126157 | root | "mock,7_days" | 0.37 | LC |
| SRR5126155 | root | "mock,7_days" | 0.02 | LC |
| SRR6168980 | leaf | none (control) | 0.00 | LC |
| SRR7265409 | coleoptile | 3dN | 0.04 | LC |
| SRR7265408 | coleoptile | 3dA | 0.00 | LC |
| SRR7265407 | coleoptile | 3dA | 0.10 | LC |
| SRR7265406 | coleoptile | 3dA | 0.26 | LC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.29 | LC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.21 | LC |
| SRR4947478 | root | control | 0.20 | LC |
| SRR4947479 | root | control | 0.13 | LC |
| SRR2338869 | endosprem | high_temperature | 0.42 | LC |
| SRR6502108 | root | control | 0.33 | LC |
| SRR6502105 | root | 100 mM NaCl | 0.27 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502107 | root | control | 0.16 | LC |
| SRR6502106 | root | control | 0.15 | LC |
| SRR5856931 | leaf | salt | 0.00 | LC |
| SRR5856930 | leaf | salt | 0.04 | LC |
| SRR5856933 | leaf | control | 0.13 | LC |
| SRR5856932 | leaf | salt | 0.06 | LC |
| SRR5856937 | leaf | salt | 0.00 | LC |
| SRR5856936 | leaf | salt | 0.03 | LC |
| SRR4947498 | root | Al | 0.28 | LC |
| SRR4947499 | root | Al | 0.13 | LC |
| SRR4947492 | root | Al | 0.19 | LC |
| SRR4947493 | root | Al | 0.22 | LC |
| SRR4947490 | root | Al | 0.02 | LC |
| SRR4947491 | root | Al | 0.00 | LC |
| SRR4947496 | root | control | 0.07 | LC |
| SRR4947497 | root | control | 0.17 | LC |
| SRR4947494 | root | control | 0.17 | LC |
| SRR4947495 | root | control | 0.08 | LC |
| SRR5126167 | root | "mock,14_days" | 0.21 | LC |
| SRR5126165 | root | "mock,14_days" | 0.13 | LC |
| SRR7265382 | embryo | 3hA | 0.28 | LC |
| SRR7265383 | embryo | 3hA | 0.36 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.12 | LC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.12 | LC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.21 | LC |
| SRR2154082 | seedling | wt | 0.06 | LC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.14 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.05 | LC |
| SRR7265373 | embryo | dry seed 0 h | 0.04 | LC |
| SRR1213694 | root | wt | 0.04 | LC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.05 | LC |
| SRR4947489 | root | control | 0.15 | LC |
| SRR4947488 | root | control | 0.14 | LC |
| SRR4947481 | root | control | 0.00 | LC |
| SRR4947480 | root | control | 0.00 | LC |
| SRR4947483 | root | Al | 0.15 | LC |
| SRR4947482 | root | Al | 0.05 | LC |
| SRR4947485 | root | Al | 0.07 | LC |
| SRR4947484 | root | Al | 0.00 | LC |
| SRR4947487 | root | control | 0.00 | LC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.17 | LC |
| SRR6502093 | root | 100 mM NaCl | 0.37 | LC |
| SRR6502092 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502091 | root | 100 mM NaCl | 0.09 | LC |
| SRR6502096 | root | control | 0.06 | LC |
| SRR6502095 | root | control | 0.38 | LC |
| SRR6502094 | root | control | 0.00 | LC |
| SRR7265394 | embryo | 24hA | 0.45 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.28 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 0.98 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.06 | LC |
| SRR1740436 | root_differentiation_zone | wt | 0.00 | LC |
| SRR6168979 | leaf | none (control) | 0.00 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.00 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.00 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.13 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.38 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.44 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.41 | LC |
| SRR5126148 | root | "mock,1_day" | 0.11 | LC |
| SRR5126149 | root | "mock,1_day" | 0.01 | LC |
| SRR5856938 | leaf | salt | 0.00 | LC |
| SRR5126147 | root | "mock,1_day" | 0.06 | LC |
| SRR7265414 | coleoptile | 4dA | 0.22 | LC |
| SRR7265415 | coleoptile | 4dN | 0.35 | LC |
| SRR7265416 | coleoptile | 4dN | 0.09 | LC |
| SRR7265417 | coleoptile | 4dN | 0.11 | LC |
| SRR7265410 | coleoptile | 3dN | 0.13 | LC |
| SRR7265412 | coleoptile | 4dA | 0.00 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.02 | LC |
| SRR7265418 | coleoptile | 3dN1dA | 0.06 | LC |
| SRR7265419 | coleoptile | 3dN1dA | 0.00 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.85 | LC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.10 | LC |
| SRR5856935 | leaf | control | 0.12 | LC |
| SRR5856934 | leaf | control | 0.08 | LC |
| SRR7265420 | coleoptile | 3dN1dA | 0.00 | LC |