| SRR1740429 | root_meristematic_zone | wt | 0.13 | LC |
| SRR3209769 | leaf | Watered;Long_Day | 0.04 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.04 | LC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.01 | LC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.15 | LC |
| SRR5110439 | panicle | Dawn + 7h | 0.12 | LC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.42 | LC |
| SRR5110437 | panicle | Dawn + 7h | 0.22 | LC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.14 | LC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.02 | LC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.07 | LC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.12 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.03 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.06 | LC |
| SRR5560728 | caryopsis | wild_type | 0.07 | LC |
| SRR5560727 | caryopsis | wild_type | 0.04 | LC |
| SRR6417968 | leaf | H2O_control | 0.00 | LC |
| SRR6417969 | leaf | H2O_control | 0.07 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417967 | leaf | H2O_control | 0.24 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.05 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.18 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.05 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.25 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.01 | LC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.14 | LC |
| SRR4947508 | root | Al | 0.48 | LC |
| SRR4947509 | root | Al | 0.12 | LC |
| SRR4947502 | root | control | 0.28 | LC |
| SRR4947504 | root | control | 0.35 | LC |
| SRR4947505 | root | control | 0.43 | LC |
| SRR4947506 | root | Al | 0.10 | LC |
| SRR3098742 | seedling | wt | 0.14 | LC |
| SRR3098743 | seedling | wt | 0.14 | LC |
| SRR3098741 | seedling | wt | 0.13 | LC |
| SRR8582888 | panicle | AM | 0.06 | LC |
| SRR8582889 | panicle | AM | 0.05 | LC |
| SRR5126153 | root | "mock,7_days" | 0.08 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.13 | LC |
| SRR5126157 | root | "mock,7_days" | 0.04 | LC |
| SRR5126155 | root | "mock,7_days" | 0.15 | LC |
| SRR6168980 | leaf | none (control) | 0.07 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.04 | LC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.02 | LC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.05 | LC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.26 | LC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.34 | LC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.18 | LC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.26 | LC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.10 | LC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.14 | LC |
| SRR5110445 | panicle | Dusk | 0.17 | LC |
| SRR5110440 | panicle | Dawn + 7h | 0.57 | LC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.12 | LC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.22 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.02 | LC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4947478 | root | control | 0.00 | LC |
| SRR4947479 | root | control | 0.06 | LC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.03 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.19 | LC |
| SRR358798 | callus | wt | 0.05 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR358797 | callus | wt | 0.00 | LC |
| SRR358794 | seedling | wt | 0.30 | LC |
| SRR358795 | callus | wt | 0.00 | LC |
| SRR358792 | seedling | wt | 0.45 | LC |
| SRR358793 | seedling | wt | 0.38 | LC |
| SRR358791 | seedling | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.12 | LC |
| SRR2338868 | endosprem | high_temperature | 0.00 | LC |
| SRR6502105 | root | 100 mM NaCl | 0.09 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.07 | LC |
| SRR6502107 | root | control | 0.03 | LC |
| SRR6502106 | root | control | 0.00 | LC |
| SRR6502101 | leaf | control | 0.12 | LC |
| SRR6502100 | leaf | control | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.00 | LC |
| SRR3209777 | leaf | Watered;Long_Day | 0.14 | LC |
| SRR3209776 | leaf | Drought;Short_Day | 0.00 | LC |
| SRR3209775 | leaf | Drought;Short_Day | 0.22 | LC |
| SRR3209774 | leaf | Watered;Short_Day | 0.00 | LC |
| SRR3209773 | leaf | Watered;Short_Day | 0.00 | LC |
| SRR3209771 | leaf | Drought;Long_Day | 0.19 | LC |
| SRR3209770 | leaf | Watered;Long_Day | 0.00 | LC |
| SRR3209779 | leaf | Watered;Short_Day | 0.00 | LC |
| SRR5856931 | leaf | salt | 0.12 | LC |
| SRR5856932 | leaf | salt | 0.12 | LC |
| SRR5278379 | pistil | "Balilla,S3" | 0.14 | LC |
| SRR5278378 | pistil | "Balilla,S3" | 0.30 | LC |
| SRR4947492 | root | Al | 0.16 | LC |
| SRR4947493 | root | Al | 0.46 | LC |
| SRR4947496 | root | control | 0.22 | LC |
| SRR4947494 | root | control | 0.21 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.14 | LC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.22 | LC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.28 | LC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.14 | LC |
| SRR5126169 | root | "mock,14_days" | 0.14 | LC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.29 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.16 | LC |
| SRR5126167 | root | "mock,14_days" | 0.13 | LC |
| SRR5126165 | root | "mock,14_days" | 0.06 | LC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.12 | LC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.04 | LC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.13 | LC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.10 | LC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.08 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.28 | LC |
| SRR6502085 | leaf | 100 mM NaCl | 0.27 | LC |
| SRR6502086 | leaf | 100 mM NaCl | 0.26 | LC |
| SRR6502087 | leaf | 100 mM NaCl | 0.20 | LC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.05 | LC |
| SRR8611900 | leaf | Non-inoculated | 0.11 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.04 | LC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.48 | LC |
| SRR6168975 | leaf | none (control) | 0.09 | LC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.23 | LC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.13 | LC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.21 | LC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.37 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.30 | LC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.06 | LC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.08 | LC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.20 | LC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.13 | LC |
| SRR1761530 | leaf | control | 0.00 | LC |
| SRR1761531 | leaf | control | 0.00 | LC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.00 | LC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.12 | LC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.04 | LC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.23 | LC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.13 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.08 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.17 | LC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.21 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.15 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.80 | LC |
| SRR504365 | leaf | wt | 0.01 | LC |
| SRR8582891 | panicle | PM | 0.36 | LC |
| SRR8582890 | panicle | AM | 0.07 | LC |
| SRR8582893 | panicle | PM | 0.02 | LC |
| SRR8582892 | panicle | PM | 0.00 | LC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.30 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.29 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.74 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.31 | LC |
| SRR1617554 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.31 | LC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.22 | LC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.36 | LC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.37 | LC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.32 | LC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.47 | LC |
| SRR6320473 | carpel | wt | 0.35 | LC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.17 | LC |
| SRR5110457 | panicle | Dawn + 21h | 0.17 | LC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.28 | LC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.24 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457244 | flag_leaf | DAH36 | 0.05 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.11 | LC |
| SRR4457243 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.00 | LC |
| SRR6441554 | seedling | wild_type | 0.19 | LC |
| SRR8611902 | leaf | Non-inoculated | 0.07 | LC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.06 | LC |
| SRR8611901 | leaf | Non-inoculated | 0.10 | LC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.22 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.38 | LC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.08 | LC |
| SRR1213693 | leaf | wt | 0.10 | LC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.07 | LC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.00 | LC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.00 | LC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.15 | LC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.11 | LC |
| SRR4947489 | root | control | 0.23 | LC |
| SRR4947488 | root | control | 0.41 | LC |
| SRR4947481 | root | control | 0.15 | LC |
| SRR4947480 | root | control | 0.18 | LC |
| SRR4947483 | root | Al | 0.33 | LC |
| SRR4947485 | root | Al | 0.41 | LC |
| SRR4947484 | root | Al | 0.46 | LC |
| SRR4947487 | root | control | 0.32 | LC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.24 | LC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.25 | LC |
| SRR6502093 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502092 | root | 100 mM NaCl | 0.17 | LC |
| SRR6502091 | root | 100 mM NaCl | 0.01 | LC |
| SRR6502097 | leaf | 100 mM NaCl | 0.12 | LC |
| SRR6502096 | root | control | 0.15 | LC |
| SRR6502095 | root | control | 0.22 | LC |
| SRR6502094 | root | control | 0.07 | LC |
| SRR6502099 | leaf | 100 mM NaCl | 0.07 | LC |
| SRR6502098 | leaf | 100 mM NaCl | 0.17 | LC |
| SRR8240825 | leaf | wild_type | 0.10 | LC |
| SRR8240824 | leaf | wild_type | 0.03 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.64 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.60 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 0.37 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR5110460 | panicle | Dawn + 21h | 0.26 | LC |
| SRR8240820 | leaf | wild_type | 0.05 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457234 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457236 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457237 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457231 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457232 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457233 | flag_leaf | DAH4 | 0.00 | LC |
| SRR1761529 | leaf | drought | 0.38 | LC |
| SRR1761528 | leaf | drought | 0.10 | LC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.31 | LC |
| SRR3745127 | anther | wt | 0.50 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.03 | LC |
| SRR5560729 | caryopsis | wild_type | 0.26 | LC |
| SRR6168973 | leaf | none (control) | 0.10 | LC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.28 | LC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.17 | LC |
| SRR6168979 | leaf | none (control) | 0.02 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.11 | LC |
| SRR1944583 | seedling | no_treatment | 0.21 | LC |
| SRR8240826 | leaf | wild_type | 0.09 | LC |
| SRR8060835 | leaf | wild_type | 0.12 | LC |
| SRR8060837 | leaf | wild_type | 0.09 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.61 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.08 | LC |
| SRR6502102 | leaf | control | 0.00 | LC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.18 | LC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.11 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 1.35 | LC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.38 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.38 | LC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.10 | LC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.38 | LC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.10 | LC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.00 | LC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.00 | LC |
| SRR2857719 | seedling | drought_stress_0h | 0.00 | LC |
| SRR6320498 | carpel | wt | 0.43 | LC |
| SRR976168 | flag_leaf | wild_type | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.06 | LC |
| SRR5126149 | root | "mock,1_day" | 0.00 | LC |
| SRR5856938 | leaf | salt | 0.13 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR5126147 | root | "mock,1_day" | 0.06 | LC |
| SRR2857721 | seedling | drought_stress_6h | 0.06 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.04 | LC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.37 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.31 | LC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.22 | LC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.12 | LC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.28 | LC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.11 | LC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.00 | LC |