| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.55 | LC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 0.00 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.45 | LC |
| SRR6168981 | leaf | none (control) | 0.00 | LC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.09 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.09 | LC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.15 | LC |
| SRR5856928 | leaf | control | 0.00 | LC |
| SRR5856927 | leaf | control | 0.09 | LC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.31 | LC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.17 | LC |
| SRR5110439 | panicle | Dawn + 7h | 0.38 | LC |
| SRR5110438 | panicle | Dawn + 7h | 0.38 | LC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.25 | LC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110437 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110430 | panicle | Dawn | 0.31 | LC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110432 | panicle | Dawn | 0.28 | LC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.30 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.00 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417967 | leaf | H2O_control | 0.19 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.16 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.36 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.25 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.23 | LC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4947508 | root | Al | 0.38 | LC |
| SRR4947509 | root | Al | 0.00 | LC |
| SRR4947503 | root | control | 0.31 | LC |
| SRR4947504 | root | control | 0.40 | LC |
| SRR4947505 | root | control | 0.26 | LC |
| SRR4947506 | root | Al | 0.38 | LC |
| SRR4947507 | root | Al | 0.21 | LC |
| SRR5126153 | root | "mock,7_days" | 0.22 | LC |
| SRR5126157 | root | "mock,7_days" | 0.24 | LC |
| SRR6168980 | leaf | none (control) | 0.00 | LC |
| SRR6502089 | leaf | control | 0.00 | LC |
| SRR7265409 | coleoptile | 3dN | 0.00 | LC |
| SRR7265408 | coleoptile | 3dA | 0.17 | LC |
| SRR7265403 | coleoptile | 2dN | 0.14 | LC |
| SRR7265402 | coleoptile | 2dA | 0.23 | LC |
| SRR7265401 | coleoptile | 2dA | 0.15 | LC |
| SRR7265400 | coleoptile | 2dA | 0.22 | LC |
| SRR7265407 | coleoptile | 3dA | 0.00 | LC |
| SRR7265406 | coleoptile | 3dA | 0.17 | LC |
| SRR7265405 | coleoptile | 2dN | 0.00 | LC |
| SRR7265404 | coleoptile | 2dN | 0.05 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.00 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.30 | LC |
| SRR5110440 | panicle | Dawn + 7h | 0.24 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.35 | LC |
| SRR4947478 | root | control | 0.18 | LC |
| SRR4947479 | root | control | 0.15 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.29 | LC |
| SRR358798 | callus | wt | 0.00 | LC |
| SRR358796 | callus | wt | 0.94 | LC |
| SRR358797 | callus | wt | 0.00 | LC |
| SRR358794 | seedling | wt | 0.00 | LC |
| SRR358795 | callus | wt | 0.89 | LC |
| SRR358792 | seedling | wt | 0.00 | LC |
| SRR358793 | seedling | wt | 0.00 | LC |
| SRR358791 | seedling | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.17 | LC |
| SRR6502108 | root | control | 0.31 | LC |
| SRR6502104 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502106 | root | control | 0.32 | LC |
| SRR6502101 | leaf | control | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.09 | LC |
| SRR2338866 | endosprem | control | 0.00 | LC |
| SRR3209777 | leaf | Watered;Long_Day | 0.07 | LC |
| SRR3209773 | leaf | Watered;Short_Day | 0.07 | LC |
| SRR3209771 | leaf | Drought;Long_Day | 0.24 | LC |
| SRR3209770 | leaf | Watered;Long_Day | 0.19 | LC |
| SRR5278374 | pistil | "Balilla,S1" | 0.03 | LC |
| SRR5278377 | pistil | "Balilla,S2" | 0.05 | LC |
| SRR5856930 | leaf | salt | 0.10 | LC |
| SRR5856933 | leaf | control | 0.11 | LC |
| SRR5278378 | pistil | "Balilla,S3" | 0.37 | LC |
| SRR5856937 | leaf | salt | 0.13 | LC |
| SRR4947499 | root | Al | 0.17 | LC |
| SRR4947492 | root | Al | 0.00 | LC |
| SRR4947493 | root | Al | 0.38 | LC |
| SRR4947490 | root | Al | 0.41 | LC |
| SRR4947491 | root | Al | 0.17 | LC |
| SRR4947497 | root | control | 0.00 | LC |
| SRR4947494 | root | control | 0.00 | LC |
| SRR4947495 | root | control | 0.00 | LC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.26 | LC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.31 | LC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.30 | LC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.23 | LC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.00 | LC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.40 | LC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.00 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.08 | LC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.28 | LC |
| SRR5126169 | root | "mock,14_days" | 0.24 | LC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.30 | LC |
| SRR5126165 | root | "mock,14_days" | 0.18 | LC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.26 | LC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.29 | LC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.17 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.22 | LC |
| SRR6502086 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR6502087 | leaf | 100 mM NaCl | 0.32 | LC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.19 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.07 | LC |
| SRR7265388 | embryo | 12hA | 0.13 | LC |
| SRR7265389 | embryo | 12hA | 0.21 | LC |
| SRR7265384 | embryo | 3hA | 0.00 | LC |
| SRR7265386 | embryo | 3hN | 0.21 | LC |
| SRR7265380 | embryo | 1hN | 0.00 | LC |
| SRR7265383 | embryo | 3hA | 0.34 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6168975 | leaf | none (control) | 0.30 | LC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.11 | LC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.12 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.00 | LC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.32 | LC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.14 | LC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.28 | LC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.32 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.36 | LC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.28 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.38 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 0.67 | LC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 0.96 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 0.90 | LC |
| SRR8582890 | panicle | AM | 0.17 | LC |
| SRR2154083 | seedling | wt | 0.13 | LC |
| SRR2154084 | seedling | wt | 0.08 | LC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.93 | LC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.62 | LC |
| SRR1617554 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR6320473 | carpel | wt | 0.00 | LC |
| SRR5110459 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110458 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110450 | panicle | Dawn + 14h | 0.39 | LC |
| SRR5110457 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.13 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265376 | embryo | 1hA | 0.00 | LC |
| SRR7265373 | embryo | dry seed 0 h | 0.00 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.06 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.19 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.42 | LC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 1.32 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.19 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.58 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.48 | LC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.47 | LC |
| SRR4947489 | root | control | 0.21 | LC |
| SRR4947488 | root | control | 0.13 | LC |
| SRR4947481 | root | control | 0.15 | LC |
| SRR4947480 | root | control | 0.37 | LC |
| SRR4947483 | root | Al | 0.00 | LC |
| SRR4947482 | root | Al | 0.00 | LC |
| SRR4947485 | root | Al | 0.44 | LC |
| SRR4947487 | root | control | 0.00 | LC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 0.00 | LC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.44 | LC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.37 | LC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.23 | LC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.57 | LC |
| SRR6502093 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502091 | root | 100 mM NaCl | 0.25 | LC |
| SRR6502090 | leaf | control | 0.30 | LC |
| SRR6502097 | leaf | 100 mM NaCl | 0.00 | LC |
| SRR6502096 | root | control | 0.19 | LC |
| SRR6502094 | root | control | 0.37 | LC |
| SRR7265393 | embryo | 12hN | 0.37 | LC |
| SRR7265392 | embryo | 12hN | 0.17 | LC |
| SRR7265391 | embryo | 12hN | 0.24 | LC |
| SRR7265390 | embryo | 12hA | 0.00 | LC |
| SRR7265397 | embryo | 24hN | 0.00 | LC |
| SRR7265396 | embryo | 24hA | 0.00 | LC |
| SRR7265395 | embryo | 24hA | 0.27 | LC |
| SRR7265394 | embryo | 24hA | 0.00 | LC |
| SRR7265399 | embryo | 24hN | 0.38 | LC |
| SRR7265398 | embryo | 24hN | 0.00 | LC |
| SRR8240825 | leaf | wild_type | 0.10 | LC |
| SRR8240824 | leaf | wild_type | 0.07 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR5110460 | panicle | Dawn + 21h | 0.30 | LC |
| SRR8240820 | leaf | wild_type | 0.07 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.32 | LC |
| SRR4457236 | flag_leaf | DAH12 | 0.26 | LC |
| SRR1761529 | leaf | drought | 0.00 | LC |
| SRR1761528 | leaf | drought | 0.00 | LC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.16 | LC |
| SRR6168973 | leaf | none (control) | 0.23 | LC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.15 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR6168979 | leaf | none (control) | 0.00 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.00 | LC |
| SRR1944583 | seedling | no_treatment | 0.00 | LC |
| SRR1740433 | root_elongation_zone | wt | 0.16 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.00 | LC |
| SRR8240826 | leaf | wild_type | 0.04 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR6502103 | root | 100 mM NaCl | 0.00 | LC |
| SRR6502102 | leaf | control | 0.26 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 1.18 | LC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 1.21 | LC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 0.00 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 0.97 | LC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.31 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 1.27 | LC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR6320498 | carpel | wt | 0.00 | LC |
| SRR976168 | flag_leaf | wild_type | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.17 | LC |
| SRR5856938 | leaf | salt | 0.13 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.23 | LC |
| SRR7265414 | coleoptile | 4dA | 0.24 | LC |
| SRR7265415 | coleoptile | 4dN | 0.00 | LC |
| SRR7265416 | coleoptile | 4dN | 0.00 | LC |
| SRR7265417 | coleoptile | 4dN | 0.00 | LC |
| SRR7265410 | coleoptile | 3dN | 0.00 | LC |
| SRR7265411 | coleoptile | 3dN | 0.00 | LC |
| SRR7265412 | coleoptile | 4dA | 0.00 | LC |
| SRR7265413 | coleoptile | 4dA | 0.00 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.04 | LC |
| SRR7265418 | coleoptile | 3dN1dA | 0.00 | LC |
| SRR7265419 | coleoptile | 3dN1dA | 0.00 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.00 | LC |
| SRR7265420 | coleoptile | 3dN1dA | 0.17 | LC |