| SRR1740428 | root_meristematic_zone | wt | 0.00 | LC |
| SRR6168981 | leaf | none (control) | 0.00 | LC |
| SRR5856928 | leaf | control | 0.00 | LC |
| SRR5856929 | leaf | control | 0.00 | LC |
| SRR5856927 | leaf | control | 0.00 | LC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.11 | LC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.14 | LC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.12 | LC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.16 | LC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.15 | LC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.15 | LC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.12 | LC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.25 | LC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.34 | LC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.29 | LC |
| SRR5110439 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110438 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110437 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110431 | panicle | Dawn | 0.00 | LC |
| SRR5110430 | panicle | Dawn | 0.00 | LC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110432 | panicle | Dawn | 0.00 | LC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.01 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.03 | LC |
| SRR5560728 | caryopsis | wild_type | 0.00 | LC |
| SRR3745126 | anther | wt | 0.42 | LC |
| SRR5560727 | caryopsis | wild_type | 0.03 | LC |
| SRR6417968 | leaf | H2O_control | 0.20 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.21 | LC |
| SRR6417967 | leaf | H2O_control | 0.12 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.31 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.36 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.00 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.28 | LC |
| SRR4947502 | root | control | 0.00 | LC |
| SRR4947503 | root | control | 0.00 | LC |
| SRR4947506 | root | Al | 0.00 | LC |
| SRR4947507 | root | Al | 0.00 | LC |
| SRR3098742 | seedling | wt | 0.00 | LC |
| SRR3098743 | seedling | wt | 0.02 | LC |
| SRR3098741 | seedling | wt | 0.00 | LC |
| SRR8582888 | panicle | AM | 0.13 | LC |
| SRR8582889 | panicle | AM | 0.03 | LC |
| SRR5126153 | root | "mock,7_days" | 0.17 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.07 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.05 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126157 | root | "mock,7_days" | 0.00 | LC |
| SRR5126155 | root | "mock,7_days" | 0.08 | LC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.12 | LC |
| SRR6168980 | leaf | none (control) | 0.00 | LC |
| SRR7265404 | coleoptile | 2dN | 0.24 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.00 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.66 | LC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.00 | LC |
| SRR5110445 | panicle | Dusk | 0.00 | LC |
| SRR5110446 | panicle | Dusk | 0.00 | LC |
| SRR5110447 | panicle | Dusk | 0.00 | LC |
| SRR5110440 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.00 | LC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.00 | LC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.00 | LC |
| SRR5110448 | panicle | Dusk | 0.00 | LC |
| SRR5110449 | panicle | Dawn + 14h | 0.00 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.27 | LC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.30 | LC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.06 | LC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.19 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4947478 | root | control | 0.00 | LC |
| SRR4947479 | root | control | 0.00 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.16 | LC |
| SRR2338869 | endosprem | high_temperature | 0.12 | LC |
| SRR2338868 | endosprem | high_temperature | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.00 | LC |
| SRR2338866 | endosprem | control | 0.00 | LC |
| SRR5856931 | leaf | salt | 0.00 | LC |
| SRR5856930 | leaf | salt | 0.00 | LC |
| SRR5856933 | leaf | control | 0.00 | LC |
| SRR5856932 | leaf | salt | 0.00 | LC |
| SRR5856937 | leaf | salt | 0.00 | LC |
| SRR5856936 | leaf | salt | 0.00 | LC |
| SRR4947498 | root | Al | 0.00 | LC |
| SRR4947499 | root | Al | 0.00 | LC |
| SRR4947490 | root | Al | 0.00 | LC |
| SRR4947491 | root | Al | 0.00 | LC |
| SRR4947494 | root | control | 0.00 | LC |
| SRR4947495 | root | control | 0.00 | LC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.12 | LC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.49 | LC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.22 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.10 | LC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.17 | LC |
| SRR5126169 | root | "mock,14_days" | 0.11 | LC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.12 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.07 | LC |
| SRR5126167 | root | "mock,14_days" | 0.03 | LC |
| SRR5126165 | root | "mock,14_days" | 0.17 | LC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.03 | LC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR8611900 | leaf | Non-inoculated | 0.01 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.00 | LC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6168975 | leaf | none (control) | 0.00 | LC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.87 | LC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.27 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.79 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.76 | LC |
| SRR8582891 | panicle | PM | 0.18 | LC |
| SRR8582890 | panicle | AM | 0.00 | LC |
| SRR8582893 | panicle | PM | 0.15 | LC |
| SRR8582892 | panicle | PM | 0.10 | LC |
| SRR2154083 | seedling | wt | 0.00 | LC |
| SRR2154082 | seedling | wt | 0.00 | LC |
| SRR2154084 | seedling | wt | 0.00 | LC |
| SRR6320473 | carpel | wt | 0.00 | LC |
| SRR5110459 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110458 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR5110452 | panicle | Dawn + 14h | 0.00 | LC |
| SRR5110451 | panicle | Dawn + 14h | 0.00 | LC |
| SRR5110450 | panicle | Dawn + 14h | 0.00 | LC |
| SRR5110457 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.22 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.19 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.23 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.11 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.33 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.15 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.39 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.40 | LC |
| SRR6441554 | seedling | wild_type | 0.00 | LC |
| SRR6441555 | seedling | wild_type | 0.03 | LC |
| SRR8611902 | leaf | Non-inoculated | 0.00 | LC |
| SRR8611901 | leaf | Non-inoculated | 0.00 | LC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.00 | LC |
| SRR4947483 | root | Al | 0.00 | LC |
| SRR4947482 | root | Al | 0.00 | LC |
| SRR4947487 | root | control | 0.00 | LC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.51 | LC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.11 | LC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.23 | LC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.07 | LC |
| SRR7265393 | embryo | 12hN | 0.36 | LC |
| SRR7265392 | embryo | 12hN | 0.31 | LC |
| SRR7265397 | embryo | 24hN | 0.40 | LC |
| SRR7265396 | embryo | 24hA | 0.19 | LC |
| SRR8240825 | leaf | wild_type | 0.00 | LC |
| SRR8240824 | leaf | wild_type | 0.00 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR5110460 | panicle | Dawn + 21h | 0.00 | LC |
| SRR8240820 | leaf | wild_type | 0.00 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.19 | LC |
| SRR4457234 | flag_leaf | DAH12 | 0.18 | LC |
| SRR4457231 | flag_leaf | DAH4 | 0.20 | LC |
| SRR4457232 | flag_leaf | DAH4 | 0.14 | LC |
| SRR4457233 | flag_leaf | DAH4 | 0.18 | LC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR5560729 | caryopsis | wild_type | 0.03 | LC |
| SRR6168973 | leaf | none (control) | 0.08 | LC |
| SRR6168974 | leaf | none (control) | 0.00 | LC |
| SRR6168979 | leaf | none (control) | 0.00 | LC |
| SRR1740432 | root_elongation_zone | wt | 0.16 | LC |
| SRR1740433 | root_elongation_zone | wt | 0.14 | LC |
| SRR8240826 | leaf | wild_type | 0.00 | LC |
| SRR8060835 | leaf | wild_type | 0.00 | LC |
| SRR8060836 | leaf | wild_type | 0.00 | LC |
| SRR8060837 | leaf | wild_type | 0.00 | LC |
| SRR5110429 | panicle | Dawn | 0.00 | LC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.00 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 3.96 | LC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 4.37 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 1.14 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 1.60 | LC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.09 | LC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.08 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.00 | LC |
| SRR2857719 | seedling | drought_stress_0h | 0.17 | LC |
| SRR6320498 | carpel | wt | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.00 | LC |
| SRR5126149 | root | "mock,1_day" | 0.00 | LC |
| SRR5856938 | leaf | salt | 0.00 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR5126147 | root | "mock,1_day" | 0.00 | LC |
| SRR2857721 | seedling | drought_stress_6h | 0.00 | LC |
| SRR7265416 | coleoptile | 4dN | 0.40 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.06 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.81 | LC |
| SRR5856935 | leaf | control | 0.00 | LC |
| SRR5856934 | leaf | control | 0.00 | LC |