| SRR1740429 | root_meristematic_zone | wt | 0.00 | LC |
| SRR1740428 | root_meristematic_zone | wt | 0.00 | LC |
| SRR6168981 | leaf | none (control) | 0.00 | LC |
| SRR3209769 | leaf | Watered;Long_Day | 0.00 | LC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.26 | LC |
| SRR5110432 | panicle | Dawn | 0.00 | LC |
| SRR3209780 | leaf | Drought;Short_Day | 0.00 | LC |
| SRR3745125 | anther | wt | 0.00 | LC |
| SRR3745126 | anther | wt | 0.20 | LC |
| SRR5560727 | caryopsis | wild_type | 0.05 | LC |
| SRR6417968 | leaf | H2O_control | 0.18 | LC |
| SRR6417969 | leaf | H2O_control | 0.00 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.21 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.40 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.66 | LC |
| SRR4947507 | root | Al | 0.47 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.00 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.07 | LC |
| SRR5126157 | root | "mock,7_days" | 0.00 | LC |
| SRR5126155 | root | "mock,7_days" | 0.19 | LC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.00 | LC |
| SRR6168980 | leaf | none (control) | 0.00 | LC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.22 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR358798 | callus | wt | 0.00 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR358797 | callus | wt | 0.00 | LC |
| SRR358795 | callus | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.25 | LC |
| SRR2338868 | endosprem | high_temperature | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.20 | LC |
| SRR2338866 | endosprem | control | 0.75 | LC |
| SRR3209776 | leaf | Drought;Short_Day | 0.05 | LC |
| SRR3209775 | leaf | Drought;Short_Day | 0.00 | LC |
| SRR3209772 | leaf | Drought;Long_Day | 0.00 | LC |
| SRR3209771 | leaf | Drought;Long_Day | 0.00 | LC |
| SRR3209778 | leaf | Drought;Long_Day | 0.00 | LC |
| SRR5278379 | pistil | "Balilla,S3" | 0.36 | LC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.00 | LC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.13 | LC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.12 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.08 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.00 | LC |
| SRR7265384 | embryo | 3hA | 0.06 | LC |
| SRR7265385 | embryo | 3hN | 0.00 | LC |
| SRR7265386 | embryo | 3hN | 0.00 | LC |
| SRR7265387 | embryo | 3hN | 0.00 | LC |
| SRR7265380 | embryo | 1hN | 0.00 | LC |
| SRR7265381 | embryo | 1hN | 0.06 | LC |
| SRR7265382 | embryo | 3hA | 0.00 | LC |
| SRR7265383 | embryo | 3hA | 0.00 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR1761530 | leaf | control | 0.00 | LC |
| SRR1761531 | leaf | control | 0.00 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.45 | LC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 0.59 | LC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.02 | LC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.68 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.60 | LC |
| SRR6320473 | carpel | wt | 0.00 | LC |
| SRR5110459 | panicle | Dawn + 21h | 0.00 | LC |
| SRR7265379 | embryo | 1hN | 0.07 | LC |
| SRR7265378 | embryo | 1hA | 0.00 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265374 | embryo | dry seed 0 h | 0.08 | LC |
| SRR7265377 | embryo | 1hA | 0.00 | LC |
| SRR7265376 | embryo | 1hA | 0.00 | LC |
| SRR7265373 | embryo | dry seed 0 h | 0.14 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.25 | LC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 3.19 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.00 | LC |
| SRR6441554 | seedling | wild_type | 0.20 | LC |
| SRR1213694 | root | wt | 0.08 | LC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.00 | LC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.00 | LC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.00 | LC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.00 | LC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.00 | LC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.00 | LC |
| SRR7265392 | embryo | 12hN | 0.29 | LC |
| SRR7265391 | embryo | 12hN | 0.11 | LC |
| SRR7265397 | embryo | 24hN | 0.25 | LC |
| SRR7265399 | embryo | 24hN | 0.33 | LC |
| SRR7265398 | embryo | 24hN | 0.38 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.96 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR8240820 | leaf | wild_type | 0.00 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.20 | LC |
| SRR4457234 | flag_leaf | DAH12 | 0.21 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.18 | LC |
| SRR4457236 | flag_leaf | DAH12 | 0.06 | LC |
| SRR4457231 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457232 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457233 | flag_leaf | DAH4 | 0.00 | LC |
| SRR1761529 | leaf | drought | 0.00 | LC |
| SRR1761528 | leaf | drought | 0.00 | LC |
| SRR3745127 | anther | wt | 0.00 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR6168979 | leaf | none (control) | 0.00 | LC |
| SRR1740433 | root_elongation_zone | wt | 0.14 | LC |
| SRR1740430 | root_meristematic_zone | wt | 0.00 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.00 | LC |
| SRR1633182 | panicle | WT | 0.00 | LC |
| SRR8240826 | leaf | wild_type | 0.05 | LC |
| SRR1633185 | panicle | WT | 0.00 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.47 | LC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 4.77 | LC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 1.21 | LC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.53 | LC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.00 | LC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.00 | LC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.00 | LC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.00 | LC |
| SRR6320498 | carpel | wt | 0.00 | LC |
| SRR976168 | flag_leaf | wild_type | 0.22 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.17 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.77 | LC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.27 | LC |