| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.31 | LC |
| SRR6168981 | leaf | none (control) | 0.13 | LC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.00 | LC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.00 | LC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.10 | LC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.00 | LC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.00 | LC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.09 | LC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.00 | LC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.00 | LC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.00 | LC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.00 | LC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.00 | LC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.00 | LC |
| SRR3745125 | anther | wt | 0.00 | LC |
| SRR5560728 | caryopsis | wild_type | 0.24 | LC |
| SRR5560727 | caryopsis | wild_type | 0.18 | LC |
| SRR6417968 | leaf | H2O_control | 0.00 | LC |
| SRR6417969 | leaf | H2O_control | 0.00 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417967 | leaf | H2O_control | 0.13 | LC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.00 | LC |
| SRR2857720 | seedling | drought_stress_1h | 0.08 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.38 | LC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.00 | LC |
| SRR4947508 | root | Al | 0.37 | LC |
| SRR4947501 | root | Al | 0.29 | LC |
| SRR4947504 | root | control | 0.29 | LC |
| SRR4947505 | root | control | 0.00 | LC |
| SRR3098742 | seedling | wt | 0.13 | LC |
| SRR3098743 | seedling | wt | 0.07 | LC |
| SRR3098741 | seedling | wt | 0.12 | LC |
| SRR8582888 | panicle | AM | 0.00 | LC |
| SRR8582889 | panicle | AM | 0.03 | LC |
| SRR5126153 | root | "mock,7_days" | 0.22 | LC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.29 | LC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.18 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.19 | LC |
| SRR5126155 | root | "mock,7_days" | 0.17 | LC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.09 | LC |
| SRR7265409 | coleoptile | 3dN | 0.00 | LC |
| SRR7265408 | coleoptile | 3dA | 0.30 | LC |
| SRR7265403 | coleoptile | 2dN | 0.00 | LC |
| SRR7265402 | coleoptile | 2dA | 0.06 | LC |
| SRR7265401 | coleoptile | 2dA | 0.09 | LC |
| SRR7265400 | coleoptile | 2dA | 0.00 | LC |
| SRR7265407 | coleoptile | 3dA | 0.02 | LC |
| SRR7265406 | coleoptile | 3dA | 0.04 | LC |
| SRR7265405 | coleoptile | 2dN | 0.06 | LC |
| SRR7265404 | coleoptile | 2dN | 0.00 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.00 | LC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.00 | LC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.23 | LC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.00 | LC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.15 | LC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.10 | LC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.00 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | LC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.00 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.00 | LC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.09 | LC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.09 | LC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.00 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.49 | LC |
| SRR2338868 | endosprem | high_temperature | 0.00 | LC |
| SRR2338867 | endosprem | control | 0.33 | LC |
| SRR2338866 | endosprem | control | 0.00 | LC |
| SRR5278379 | pistil | "Balilla,S3" | 0.00 | LC |
| SRR5278378 | pistil | "Balilla,S3" | 0.05 | LC |
| SRR4947492 | root | Al | 0.38 | LC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.37 | LC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.32 | LC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.23 | LC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.00 | LC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.09 | LC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.06 | LC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.21 | LC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.20 | LC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.28 | LC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.32 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.10 | LC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.00 | LC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.23 | LC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.07 | LC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.00 | LC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.08 | LC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.00 | LC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.10 | LC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.05 | LC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.00 | LC |
| SRR5126169 | root | "mock,14_days" | 0.23 | LC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.15 | LC |
| SRR5126167 | root | "mock,14_days" | 0.18 | LC |
| SRR5126165 | root | "mock,14_days" | 0.22 | LC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.11 | LC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.32 | LC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR8611900 | leaf | Non-inoculated | 0.00 | LC |
| SRR8240818 | leaf | wild_type | 0.00 | LC |
| SRR8240819 | leaf | wild_type | 0.00 | LC |
| SRR7265388 | embryo | 12hA | 0.00 | LC |
| SRR7265389 | embryo | 12hA | 0.33 | LC |
| SRR7265384 | embryo | 3hA | 0.00 | LC |
| SRR7265385 | embryo | 3hN | 0.00 | LC |
| SRR7265386 | embryo | 3hN | 0.14 | LC |
| SRR7265387 | embryo | 3hN | 0.00 | LC |
| SRR7265380 | embryo | 1hN | 0.17 | LC |
| SRR7265381 | embryo | 1hN | 0.00 | LC |
| SRR7265382 | embryo | 3hA | 0.00 | LC |
| SRR7265383 | embryo | 3hA | 0.00 | LC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.13 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.76 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.00 | LC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.00 | LC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.00 | LC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.43 | LC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 1.98 | LC |
| SRR8582891 | panicle | PM | 0.00 | LC |
| SRR8582890 | panicle | AM | 0.00 | LC |
| SRR8582893 | panicle | PM | 0.14 | LC |
| SRR8582892 | panicle | PM | 0.00 | LC |
| SRR2154087 | seedling | wt | 0.13 | LC |
| SRR2154086 | seedling | wt | 0.07 | LC |
| SRR2154085 | seedling | wt | 0.16 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.00 | LC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.00 | LC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.23 | LC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.28 | LC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.32 | LC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.56 | LC |
| SRR7265378 | embryo | 1hA | 0.07 | LC |
| SRR7265375 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265374 | embryo | dry seed 0 h | 0.00 | LC |
| SRR7265377 | embryo | 1hA | 0.00 | LC |
| SRR7265376 | embryo | 1hA | 0.00 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457244 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.00 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.26 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457243 | flag_leaf | DAH36 | 0.00 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.00 | LC |
| SRR4457249 | 2nd_leaf | DAH4 | 0.00 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.00 | LC |
| SRR6441554 | seedling | wild_type | 0.00 | LC |
| SRR6441555 | seedling | wild_type | 0.00 | LC |
| SRR8611902 | leaf | Non-inoculated | 0.00 | LC |
| SRR8611901 | leaf | Non-inoculated | 0.02 | LC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.00 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.55 | LC |
| SRR1213694 | root | wt | 0.05 | LC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.08 | LC |
| SRR1213690 | flower | wt(flower buds) | 0.11 | LC |
| SRR1213693 | leaf | wt | 0.07 | LC |
| SRR1213692 | leaf | wt | 0.04 | LC |
| SRR4947489 | root | control | 0.00 | LC |
| SRR4947488 | root | control | 0.41 | LC |
| SRR4947481 | root | control | 0.00 | LC |
| SRR4947484 | root | Al | 0.37 | LC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.32 | LC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.26 | LC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.21 | LC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.05 | LC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.00 | LC |
| SRR7265393 | embryo | 12hN | 0.35 | LC |
| SRR7265392 | embryo | 12hN | 0.14 | LC |
| SRR7265391 | embryo | 12hN | 0.24 | LC |
| SRR7265390 | embryo | 12hA | 0.19 | LC |
| SRR7265397 | embryo | 24hN | 0.00 | LC |
| SRR7265396 | embryo | 24hA | 0.00 | LC |
| SRR7265395 | embryo | 24hA | 0.00 | LC |
| SRR7265394 | embryo | 24hA | 0.00 | LC |
| SRR7265399 | embryo | 24hN | 0.00 | LC |
| SRR7265398 | embryo | 24hN | 0.00 | LC |
| SRR8240825 | leaf | wild_type | 0.03 | LC |
| SRR8240824 | leaf | wild_type | 0.05 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.51 | LC |
| SRR8240820 | leaf | wild_type | 0.00 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.00 | LC |
| SRR4457234 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.00 | LC |
| SRR4457236 | flag_leaf | DAH12 | 0.02 | LC |
| SRR4457237 | flag_leaf | DAH20 | 0.16 | LC |
| SRR4457231 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457232 | flag_leaf | DAH4 | 0.00 | LC |
| SRR4457233 | flag_leaf | DAH4 | 0.00 | LC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.05 | LC |
| SRR3745127 | anther | wt | 0.00 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.00 | LC |
| SRR5560729 | caryopsis | wild_type | 0.10 | LC |
| SRR6168973 | leaf | none (control) | 0.00 | LC |
| SRR6168974 | leaf | none (control) | 0.00 | LC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.15 | LC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.23 | LC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.07 | LC |
| SRR6168979 | leaf | none (control) | 0.00 | LC |
| SRR1740431 | root_elongation_zone | wt | 0.33 | LC |
| SRR8240826 | leaf | wild_type | 0.00 | LC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 2.60 | LC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.00 | LC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.00 | LC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.18 | LC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.11 | LC |
| SRR2857719 | seedling | drought_stress_0h | 0.20 | LC |
| SRR976168 | flag_leaf | wild_type | 0.00 | LC |
| SRR5126148 | root | "mock,1_day" | 0.00 | LC |
| SRR5126149 | root | "mock,1_day" | 0.07 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.00 | LC |
| SRR5126147 | root | "mock,1_day" | 0.20 | LC |
| SRR7265414 | coleoptile | 4dA | 0.00 | LC |
| SRR7265415 | coleoptile | 4dN | 0.22 | LC |
| SRR7265416 | coleoptile | 4dN | 0.00 | LC |
| SRR7265417 | coleoptile | 4dN | 0.00 | LC |
| SRR7265410 | coleoptile | 3dN | 0.14 | LC |
| SRR7265411 | coleoptile | 3dN | 0.19 | LC |
| SRR7265412 | coleoptile | 4dA | 0.00 | LC |
| SRR7265413 | coleoptile | 4dA | 0.00 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.00 | LC |
| SRR7265418 | coleoptile | 3dN1dA | 0.00 | LC |
| SRR7265419 | coleoptile | 3dN1dA | 0.00 | LC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.20 | LC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.00 | LC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.84 | LC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.15 | LC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.16 | LC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.29 | LC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.26 | LC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.00 | LC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.00 | LC |
| SRR7265420 | coleoptile | 3dN1dA | 0.00 | LC |