| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 0.47 | LC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.13 | LC |
| SRR5856928 | leaf | control | 0.03 | LC |
| SRR5856929 | leaf | control | 0.04 | LC |
| SRR5856927 | leaf | control | 0.04 | LC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.33 | LC |
| SRR5110439 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.18 | LC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110437 | panicle | Dawn + 7h | 0.24 | LC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR5110431 | panicle | Dawn | 0.15 | LC |
| SRR5110430 | panicle | Dawn | 0.00 | LC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.00 | LC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.31 | LC |
| SRR1740435 | root_differentiation_zone | wt | 0.00 | LC |
| SRR6417968 | leaf | H2O_control | 0.00 | LC |
| SRR6417969 | leaf | H2O_control | 0.20 | LC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.00 | LC |
| SRR6417967 | leaf | H2O_control | 0.07 | LC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.17 | LC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.21 | LC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.33 | LC |
| SRR4947509 | root | Al | 0.41 | LC |
| SRR4947500 | root | Al | 0.30 | LC |
| SRR4947501 | root | Al | 0.33 | LC |
| SRR4947502 | root | control | 0.00 | LC |
| SRR4947503 | root | control | 0.14 | LC |
| SRR4947505 | root | control | 0.21 | LC |
| SRR4947506 | root | Al | 0.00 | LC |
| SRR4947507 | root | Al | 0.22 | LC |
| SRR3098743 | seedling | wt | 0.10 | LC |
| SRR3098741 | seedling | wt | 0.10 | LC |
| SRR8582888 | panicle | AM | 0.20 | LC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.16 | LC |
| SRR7265409 | coleoptile | 3dN | 0.21 | LC |
| SRR7265408 | coleoptile | 3dA | 0.20 | LC |
| SRR7265403 | coleoptile | 2dN | 0.28 | LC |
| SRR7265406 | coleoptile | 3dA | 0.26 | LC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.00 | LC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.00 | LC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.41 | LC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.30 | LC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.36 | LC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.65 | LC |
| SRR5110445 | panicle | Dusk | 0.27 | LC |
| SRR5110440 | panicle | Dawn + 7h | 0.00 | LC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.30 | LC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.15 | LC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.00 | LC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.35 | LC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.18 | LC |
| SRR4947478 | root | control | 0.00 | LC |
| SRR4947479 | root | control | 0.09 | LC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.26 | LC |
| SRR358798 | callus | wt | 0.00 | LC |
| SRR358796 | callus | wt | 0.00 | LC |
| SRR358797 | callus | wt | 0.00 | LC |
| SRR358795 | callus | wt | 0.00 | LC |
| SRR2338869 | endosprem | high_temperature | 0.02 | LC |
| SRR2338868 | endosprem | high_temperature | 0.13 | LC |
| SRR2338867 | endosprem | control | 0.35 | LC |
| SRR2338866 | endosprem | control | 0.45 | LC |
| SRR3209773 | leaf | Watered;Short_Day | 0.18 | LC |
| SRR3209772 | leaf | Drought;Long_Day | 0.24 | LC |
| SRR5856931 | leaf | salt | 0.01 | LC |
| SRR5856930 | leaf | salt | 0.00 | LC |
| SRR5856933 | leaf | control | 0.06 | LC |
| SRR5856932 | leaf | salt | 0.00 | LC |
| SRR5856937 | leaf | salt | 0.05 | LC |
| SRR5856936 | leaf | salt | 0.04 | LC |
| SRR4947498 | root | Al | 0.00 | LC |
| SRR4947499 | root | Al | 0.00 | LC |
| SRR4947492 | root | Al | 0.49 | LC |
| SRR4947490 | root | Al | 0.20 | LC |
| SRR4947491 | root | Al | 0.15 | LC |
| SRR4947497 | root | control | 0.50 | LC |
| SRR4947494 | root | control | 0.19 | LC |
| SRR4947495 | root | control | 0.00 | LC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.22 | LC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.19 | LC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.14 | LC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.00 | LC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.23 | LC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.28 | LC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.00 | LC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.21 | LC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.00 | LC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | LC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.12 | LC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.28 | LC |
| SRR1761530 | leaf | control | 0.25 | LC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.30 | LC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.28 | LC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.19 | LC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.14 | LC |
| SRR8582891 | panicle | PM | 0.27 | LC |
| SRR8582890 | panicle | AM | 0.04 | LC |
| SRR8582892 | panicle | PM | 0.60 | LC |
| SRR1617559 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617553 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617550 | shoot_apical_meristem | no collect | 0.73 | LC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.49 | LC |
| SRR1617554 | shoot_apical_meristem | no collect | 0.00 | LC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.00 | LC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.34 | LC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.20 | LC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.38 | LC |
| SRR5110459 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110458 | panicle | Dawn + 21h | 0.20 | LC |
| SRR5110452 | panicle | Dawn + 14h | 0.27 | LC |
| SRR5110450 | panicle | Dawn + 14h | 0.00 | LC |
| SRR5110457 | panicle | Dawn + 21h | 0.00 | LC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.22 | LC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.00 | LC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.15 | LC |
| SRR4457245 | flag_leaf | DAH36 | 0.19 | LC |
| SRR4457247 | flag_leaf | DAH44 | 0.19 | LC |
| SRR4457246 | flag_leaf | DAH44 | 0.25 | LC |
| SRR4457241 | flag_leaf | DAH28 | 0.18 | LC |
| SRR4457240 | flag_leaf | DAH28 | 0.21 | LC |
| SRR4457243 | flag_leaf | DAH36 | 0.16 | LC |
| SRR4457242 | flag_leaf | DAH28 | 0.16 | LC |
| SRR4457248 | flag_leaf | DAH44 | 0.48 | LC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.34 | LC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.35 | LC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.24 | LC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.25 | LC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | LC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.16 | LC |
| SRR4947483 | root | Al | 0.07 | LC |
| SRR4947482 | root | Al | 0.00 | LC |
| SRR4947485 | root | Al | 0.22 | LC |
| SRR4947484 | root | Al | 0.23 | LC |
| SRR4947487 | root | control | 0.02 | LC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 0.00 | LC |
| SRR6502096 | root | control | 0.22 | LC |
| SRR6502095 | root | control | 0.35 | LC |
| SRR7265398 | embryo | 24hN | 0.43 | LC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.00 | LC |
| SRR6053395 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053396 | leaf | gibberellic acid (GA) | 0.00 | LC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 0.00 | LC |
| SRR5110460 | panicle | Dawn + 21h | 0.30 | LC |
| SRR4457238 | flag_leaf | DAH20 | 0.12 | LC |
| SRR4457239 | flag_leaf | DAH20 | 0.24 | LC |
| SRR4457235 | flag_leaf | DAH12 | 0.24 | LC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.17 | LC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.11 | LC |
| SRR1740436 | root_differentiation_zone | wt | 0.12 | LC |
| SRR1740434 | root_differentiation_zone | wt | 0.00 | LC |
| SRR1944583 | seedling | no_treatment | 0.23 | LC |
| SRR1633182 | panicle | WT | 0.19 | LC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.76 | LC |
| SRR5110429 | panicle | Dawn | 0.00 | LC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.25 | LC |
| SRR976168 | flag_leaf | wild_type | 0.00 | LC |
| SRR5126149 | root | "mock,1_day" | 0.34 | LC |
| SRR5856938 | leaf | salt | 0.00 | LC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.36 | LC |
| SRR7265415 | coleoptile | 4dN | 0.30 | LC |
| SRR7265416 | coleoptile | 4dN | 0.41 | LC |
| SRR7265417 | coleoptile | 4dN | 0.26 | LC |
| SRR7265410 | coleoptile | 3dN | 0.23 | LC |
| SRR7265412 | coleoptile | 4dA | 0.00 | LC |
| SRR7265413 | coleoptile | 4dA | 0.17 | LC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.19 | LC |
| SRR7265418 | coleoptile | 3dN1dA | 0.23 | LC |
| SRR7265419 | coleoptile | 3dN1dA | 0.39 | LC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.40 | LC |
| SRR5856935 | leaf | control | 0.07 | LC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.30 | LC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.17 | LC |
| SRR5856934 | leaf | control | 0.05 | LC |