| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 277.62 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 228.06 | HC |
| SRR7058097 | leaf | rice_mock | 180.90 | HC |
| SRR7058096 | leaf | rice_mock | 197.70 | HC |
| SRR5940086 | panicle | Wild type | 78.80 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 61.15 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 80.12 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 109.95 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 113.70 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 29.50 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 76.83 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 39.92 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 38.36 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 703.38 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 74.35 | HC |
| SRR4098203 | seedling | No treatment | 154.44 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 49.64 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 51.62 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 252.64 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 142.95 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 128.40 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 238.80 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 32.66 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 38.70 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 32.05 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 80.80 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 39.50 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 75.82 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 156.95 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 303.65 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 147.15 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 114.40 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 216.64 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 79.40 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 67.28 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 70.64 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 66.44 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 82.64 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 298.04 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 184.38 | HC |
| SRR3130370 | leaf | control 8 hour | 435.04 | HC |
| SRR3130369 | leaf | control 8 hour | 343.12 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 281.07 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 243.30 | HC |
| SRR3110557 | shoot | shoot treated | 376.29 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 205.20 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 481.03 | HC |
| SRR2862365 | leaf | mock leaf cells | 391.35 | HC |
| SRR2862364 | leaf | mock leaf cells | 646.45 | HC |
| SRR2862363 | leaf | mock leaf cells | 531.70 | HC |
| SRR2646853 | panicle | FP | 24.80 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 698.00 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 747.15 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 516.25 | HC |
| SRR2154075 | seed | Taipei309_seed | 724.16 | HC |
| SRR2154074 | seed | Nipponbare_seed | 1006.56 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 1785.56 | HC |
| SRR2154072 | seed | Rathuwee_seed | 1079.35 | HC |
| SRR2154071 | seed | KDM105_seed | 1848.80 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 273.45 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 324.30 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 365.10 | HC |
| SRR1740023 | seedling | IR64-Control | 53.55 | HC |
| SRR1654490 | leaf | wild type | 533.43 | HC |
| SRR1013789 | panicle | 93-11_PA | 802.52 | HC |
| SRR1013788 | panicle | LYP9_PA | 400.48 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 477.28 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 394.32 | HC |
| SRR089622 | panicle | salt | 70.55 | HC |
| SRR089621 | panicle | cold | 72.25 | HC |
| SRR089620 | panicle | drought | 49.20 | HC |