| SRR4457258 | 2nd_leaf | DAH28 | 4.39 | HC |
| SRR3745126 | anther | wt | 11.18 | HC |
| SRR3745127 | anther | wt | 16.04 | HC |
| SRR6320473 | carpel | wt | 19.29 | HC |
| SRR5560729 | caryopsis | wild_type | 11.57 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 12.29 | HC |
| SRR7265400 | coleoptile | 2dA | 5.06 | HC |
| SRR7265401 | coleoptile | 2dA | 3.83 | HC |
| SRR7265404 | coleoptile | 2dN | 5.43 | HC |
| SRR7265407 | coleoptile | 3dA | 6.99 | HC |
| SRR7265408 | coleoptile | 3dA | 3.86 | HC |
| SRR7265409 | coleoptile | 3dN | 5.48 | HC |
| SRR7265412 | coleoptile | 4dA | 5.00 | HC |
| SRR7265414 | coleoptile | 4dA | 7.04 | HC |
| SRR7265416 | coleoptile | 4dN | 7.57 | HC |
| SRR7265417 | coleoptile | 4dN | 7.59 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 5.50 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.99 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 13.39 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 12.27 | HC |
| SRR7265391 | embryo | 12hN | 7.60 | HC |
| SRR7265396 | embryo | 24hA | 5.49 | HC |
| SRR7265397 | embryo | 24hN | 8.58 | HC |
| SRR8060835 | leaf | wild_type | 54.22 | HC |
| SRR8060836 | leaf | wild_type | 28.29 | HC |
| SRR8240824 | leaf | wild_type | 10.63 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.27 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.20 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.72 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.14 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 13.67 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 21.02 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 10.40 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.12 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.79 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.70 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 14.57 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 31.50 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 9.06 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 28.95 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 25.42 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 20.28 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 25.04 | HC |
| SRR8611900 | leaf | Non-inoculated | 72.27 | HC |
| SRR8611901 | leaf | Non-inoculated | 90.07 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 10.51 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 23.46 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 10.76 | HC |
| SRR1213692 | leaf | wt | 15.05 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 11.06 | HC |
| SRR5856927 | leaf | control | 3.25 | HC |
| SRR5856928 | leaf | control | 4.31 | HC |
| SRR5856929 | leaf | control | 32.45 | HC |
| SRR5856930 | leaf | salt | 36.26 | HC |
| SRR5856931 | leaf | salt | 32.56 | HC |
| SRR5856933 | leaf | control | 4.96 | HC |
| SRR5856934 | leaf | control | 20.06 | HC |
| SRR5856936 | leaf | salt | 2.08 | HC |
| SRR5856937 | leaf | salt | 3.21 | HC |
| SRR5856938 | leaf | salt | 3.08 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 37.21 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 29.66 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 30.13 | HC |
| SRR6168973 | leaf | none (control) | 12.06 | HC |
| SRR6168974 | leaf | none (control) | 8.90 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 8.00 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 10.60 | HC |
| SRR6168979 | leaf | none (control) | 26.05 | HC |
| SRR6168981 | leaf | none (control) | 22.26 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 19.68 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 22.20 | HC |
| SRR8582888 | panicle | AM | 9.24 | HC |
| SRR8582889 | panicle | AM | 2.83 | HC |
| SRR8582890 | panicle | AM | 9.30 | HC |
| SRR8582891 | panicle | PM | 9.95 | HC |
| SRR5110429 | panicle | Dawn | 5.80 | HC |
| SRR5110431 | panicle | Dawn | 5.97 | HC |
| SRR5110432 | panicle | Dawn | 7.05 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 31.18 | HC |
| SRR5110437 | panicle | Dawn + 7h | 33.08 | HC |
| SRR5110440 | panicle | Dawn + 7h | 21.20 | HC |
| SRR5110451 | panicle | Dawn + 14h | 11.99 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.95 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 6.01 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 38.10 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 21.15 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.81 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 7.54 | HC |
| SRR5126153 | root | "mock,7_days" | 13.14 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.59 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 16.20 | HC |
| SRR1213694 | root | wt | 10.62 | HC |
| SRR1213695 | root | wt | 7.61 | HC |
| SRR4947478 | root | control | 6.92 | HC |
| SRR4947479 | root | control | 21.00 | HC |
| SRR4947480 | root | control | 9.06 | HC |
| SRR4947481 | root | control | 14.35 | HC |
| SRR4947482 | root | Al | 23.15 | HC |
| SRR4947485 | root | Al | 9.69 | HC |
| SRR4947487 | root | control | 21.57 | HC |
| SRR4947488 | root | control | 24.36 | HC |
| SRR4947490 | root | Al | 21.88 | HC |
| SRR4947492 | root | Al | 19.09 | HC |
| SRR4947493 | root | Al | 18.16 | HC |
| SRR4947494 | root | control | 21.05 | HC |
| SRR4947498 | root | Al | 10.09 | HC |
| SRR4947500 | root | Al | 7.66 | HC |
| SRR4947501 | root | Al | 19.00 | HC |
| SRR4947502 | root | control | 9.86 | HC |
| SRR4947503 | root | control | 23.11 | HC |
| SRR4947504 | root | control | 21.90 | HC |
| SRR4947506 | root | Al | 22.44 | HC |
| SRR4947508 | root | Al | 24.24 | HC |
| SRR4947509 | root | Al | 15.40 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.23 | HC |
| SRR1740436 | root_differentiation_zone | wt | 17.08 | HC |
| SRR1740428 | root_meristematic_zone | wt | 5.00 | HC |
| SRR6441555 | seedling | wild_type | 53.61 | HC |
| SRR2154082 | seedling | wt | 29.75 | HC |
| SRR2154083 | seedling | wt | 6.50 | HC |
| SRR2154085 | seedling | wt | 15.92 | HC |
| SRR3098743 | seedling | wt | 2.94 | HC |
| SRR358792 | seedling | wt | 18.76 | HC |
| SRR358794 | seedling | wt | 14.04 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 8.44 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.73 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 27.63 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 36.85 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 39.96 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 57.01 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 79.80 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 48.50 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 79.92 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 90.12 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 34.85 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 9.04 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 23.91 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 21.54 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 22.42 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 12.56 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.50 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 41.03 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 9.58 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 8.95 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 22.89 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.21 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.54 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.58 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.92 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 11.09 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 20.83 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 25.78 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 6.14 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 12.35 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 5.90 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 22.57 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 16.98 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 30.84 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 28.31 | HC |