| SRR4457249 | 2nd_leaf | DAH4 | 7.62 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 5.00 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.26 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 7.11 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 6.88 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 5.50 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 6.19 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 7.04 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 6.60 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.65 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.39 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.80 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 9.78 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 8.52 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 6.51 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 8.71 | HC |
| SRR6320498 | carpel | wt | 10.65 | HC |
| SRR5560729 | caryopsis | wild_type | 5.20 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.20 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.83 | HC |
| SRR7265400 | coleoptile | 2dA | 4.23 | HC |
| SRR7265407 | coleoptile | 3dA | 3.65 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.85 | HC |
| SRR7265373 | embryo | dry seed 0 h | 8.66 | HC |
| SRR7265374 | embryo | dry seed 0 h | 9.65 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.24 | HC |
| SRR7265376 | embryo | 1hA | 4.14 | HC |
| SRR7265377 | embryo | 1hA | 5.33 | HC |
| SRR7265378 | embryo | 1hA | 5.35 | HC |
| SRR7265379 | embryo | 1hN | 7.38 | HC |
| SRR7265380 | embryo | 1hN | 6.24 | HC |
| SRR7265381 | embryo | 1hN | 6.10 | HC |
| SRR7265383 | embryo | 3hA | 7.15 | HC |
| SRR7265384 | embryo | 3hA | 5.68 | HC |
| SRR7265385 | embryo | 3hN | 5.75 | HC |
| SRR7265386 | embryo | 3hN | 3.80 | HC |
| SRR7265387 | embryo | 3hN | 5.34 | HC |
| SRR7265390 | embryo | 12hA | 4.63 | HC |
| SRR7265394 | embryo | 24hA | 5.79 | HC |
| SRR4457231 | flag_leaf | DAH4 | 5.19 | HC |
| SRR4457232 | flag_leaf | DAH4 | 7.39 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.81 | HC |
| SRR4457234 | flag_leaf | DAH12 | 6.80 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.18 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.38 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.78 | HC |
| SRR4457238 | flag_leaf | DAH20 | 5.15 | HC |
| SRR4457239 | flag_leaf | DAH20 | 6.46 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.48 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.09 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.50 | HC |
| SRR4457244 | flag_leaf | DAH36 | 7.13 | HC |
| SRR4457245 | flag_leaf | DAH36 | 7.04 | HC |
| SRR4457246 | flag_leaf | DAH44 | 6.48 | HC |
| SRR4457248 | flag_leaf | DAH44 | 6.77 | HC |
| SRR1213691 | flower | wt | 4.14 | HC |
| SRR8060835 | leaf | wild_type | 12.03 | HC |
| SRR8060836 | leaf | wild_type | 14.09 | HC |
| SRR8060837 | leaf | wild_type | 12.07 | HC |
| SRR8240818 | leaf | wild_type | 2.67 | HC |
| SRR8240820 | leaf | wild_type | 5.14 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.70 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.57 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 5.07 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.65 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.66 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.27 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.47 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.80 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.30 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 8.75 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.60 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.76 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.61 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.75 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.90 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.08 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.18 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.18 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.94 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.12 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.82 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.51 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 11.49 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 9.87 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 7.76 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 10.30 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 8.41 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 10.30 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 8.41 | HC |
| SRR1761530 | leaf | control | 10.30 | HC |
| SRR1761531 | leaf | control | 8.41 | HC |
| SRR504365 | leaf | wt | 13.91 | HC |
| SRR6417967 | leaf | H2O_control | 5.52 | HC |
| SRR6417968 | leaf | H2O_control | 4.56 | HC |
| SRR6417969 | leaf | H2O_control | 4.82 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.85 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 6.01 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.51 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.75 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.90 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 5.35 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.73 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.95 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 7.29 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.72 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.08 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.43 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.14 | HC |
| SRR8611901 | leaf | Non-inoculated | 8.80 | HC |
| SRR8611902 | leaf | Non-inoculated | 9.69 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.39 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.34 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.94 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.70 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.02 | HC |
| SRR1213692 | leaf | wt | 6.16 | HC |
| SRR1213693 | leaf | wt | 4.03 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 7.39 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.68 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 8.77 | HC |
| SRR6502088 | leaf | control | 7.99 | HC |
| SRR6502089 | leaf | control | 8.84 | HC |
| SRR6502090 | leaf | control | 8.07 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 10.25 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 8.21 | HC |
| SRR6502100 | leaf | control | 7.61 | HC |
| SRR6502101 | leaf | control | 6.60 | HC |
| SRR6502102 | leaf | control | 9.59 | HC |
| SRR5856927 | leaf | control | 2.58 | HC |
| SRR5856935 | leaf | control | 2.67 | HC |
| SRR5856938 | leaf | salt | 1.93 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 9.31 | HC |
| SRR6168973 | leaf | none (control) | 6.65 | HC |
| SRR6168974 | leaf | none (control) | 5.87 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.32 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 9.33 | HC |
| SRR6168979 | leaf | none (control) | 3.20 | HC |
| SRR6168980 | leaf | none (control) | 3.32 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 3.02 | HC |
| SRR8582888 | panicle | AM | 6.84 | HC |
| SRR8582889 | panicle | AM | 4.43 | HC |
| SRR8582890 | panicle | AM | 6.76 | HC |
| SRR8582891 | panicle | PM | 18.67 | HC |
| SRR8582892 | panicle | PM | 18.05 | HC |
| SRR8582893 | panicle | PM | 24.47 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.23 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.52 | HC |
| SRR1633182 | panicle | WT | 24.79 | HC |
| SRR1633185 | panicle | WT | 32.49 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.70 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 9.32 | HC |
| SRR1213695 | root | wt | 4.29 | HC |
| SRR6441554 | seedling | wild_type | 4.50 | HC |
| SRR6441555 | seedling | wild_type | 3.78 | HC |
| SRR2154086 | seedling | wt | 4.47 | HC |
| SRR2154084 | seedling | wt | 5.68 | HC |
| SRR2154085 | seedling | wt | 6.09 | HC |
| SRR2154087 | seedling | wt | 7.16 | HC |
| SRR3098741 | seedling | wt | 5.82 | HC |
| SRR3098742 | seedling | wt | 8.97 | HC |
| SRR3098743 | seedling | wt | 6.92 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.42 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.87 | HC |
| SRR1944583 | seedling | no_treatment | 6.15 | HC |
| SRR358791 | seedling | wt | 9.92 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.66 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 8.18 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.39 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 11.62 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 19.32 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.85 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.65 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 15.19 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.28 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.74 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.17 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.63 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 11.24 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 10.65 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.34 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 11.01 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.88 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.18 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.88 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 7.87 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 7.65 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.79 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 7.16 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.06 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 7.34 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.41 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.69 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.17 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 12.01 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.83 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 6.82 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 6.79 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.42 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.94 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.34 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.04 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.08 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 14.43 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 8.96 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 16.26 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.98 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 12.76 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 13.31 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 8.15 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 9.46 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 10.10 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 11.61 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.83 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 9.89 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 9.12 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 16.11 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 5.40 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.96 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.64 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.51 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.45 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.36 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.15 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.55 | HC |