| SRR4457249 | 2nd_leaf | DAH4 | 6.52 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 5.48 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.81 | HC |
| SRR5560727 | caryopsis | wild_type | 8.28 | HC |
| SRR5560728 | caryopsis | wild_type | 6.37 | HC |
| SRR5560729 | caryopsis | wild_type | 6.35 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 10.90 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 9.52 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.00 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 10.69 | HC |
| SRR7265405 | coleoptile | 2dN | 3.82 | HC |
| SRR7265407 | coleoptile | 3dA | 3.35 | HC |
| SRR7265408 | coleoptile | 3dA | 3.14 | HC |
| SRR7265410 | coleoptile | 3dN | 4.93 | HC |
| SRR7265411 | coleoptile | 3dN | 3.87 | HC |
| SRR7265414 | coleoptile | 4dA | 4.81 | HC |
| SRR7265416 | coleoptile | 4dN | 5.26 | HC |
| SRR7265417 | coleoptile | 4dN | 4.32 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.69 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.86 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 14.38 | HC |
| SRR2338867 | endosprem | control | 3.41 | HC |
| SRR2338868 | endosprem | high_temperature | 6.66 | HC |
| SRR2338869 | endosprem | high_temperature | 7.88 | HC |
| SRR976168 | flag_leaf | wild_type | 5.68 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.58 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.45 | HC |
| SRR4457233 | flag_leaf | DAH4 | 4.14 | HC |
| SRR4457235 | flag_leaf | DAH12 | 3.81 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.73 | HC |
| SRR1213690 | flower | wt(flower buds) | 7.95 | HC |
| SRR1213691 | flower | wt | 8.03 | HC |
| SRR8060835 | leaf | wild_type | 3.23 | HC |
| SRR8060836 | leaf | wild_type | 4.82 | HC |
| SRR8240824 | leaf | wild_type | 3.17 | HC |
| SRR8240826 | leaf | wild_type | 2.41 | HC |
| SRR8240818 | leaf | wild_type | 4.81 | HC |
| SRR8240819 | leaf | wild_type | 3.90 | HC |
| SRR8240820 | leaf | wild_type | 3.27 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 9.42 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.43 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.79 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 8.24 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.42 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.41 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.61 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.66 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 9.44 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.79 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 9.09 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.22 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.50 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.40 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.51 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.35 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.90 | HC |
| SRR504365 | leaf | wt | 4.45 | HC |
| SRR6417967 | leaf | H2O_control | 4.00 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 3.62 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 7.03 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 8.95 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.51 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 7.06 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.24 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.63 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 9.25 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.99 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 8.92 | HC |
| SRR8611900 | leaf | Non-inoculated | 4.06 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.25 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.57 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.04 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.24 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 13.30 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 11.10 | HC |
| SRR1213692 | leaf | wt | 7.50 | HC |
| SRR1213693 | leaf | wt | 13.74 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.23 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.47 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.56 | HC |
| SRR6502090 | leaf | control | 4.30 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.23 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 6.73 | HC |
| SRR6502100 | leaf | control | 4.89 | HC |
| SRR6168973 | leaf | none (control) | 4.72 | HC |
| SRR6168974 | leaf | none (control) | 7.16 | HC |
| SRR8582889 | panicle | AM | 1.72 | HC |
| SRR8582893 | panicle | PM | 7.70 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.25 | HC |
| SRR1633182 | panicle | WT | 6.19 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 7.14 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 6.90 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.90 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 7.88 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 11.34 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.25 | HC |
| SRR5126147 | root | "mock,1_day" | 5.81 | HC |
| SRR5126148 | root | "mock,1_day" | 5.65 | HC |
| SRR5126149 | root | "mock,1_day" | 7.70 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.00 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.17 | HC |
| SRR5126153 | root | "mock,7_days" | 4.26 | HC |
| SRR5126155 | root | "mock,7_days" | 5.80 | HC |
| SRR5126157 | root | "mock,7_days" | 9.25 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.29 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.87 | HC |
| SRR5126167 | root | "mock,14_days" | 6.12 | HC |
| SRR5126169 | root | "mock,14_days" | 7.74 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.30 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 6.65 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 11.27 | HC |
| SRR1213694 | root | wt | 11.16 | HC |
| SRR1213695 | root | wt | 12.05 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.49 | HC |
| SRR6502092 | root | 100 mM NaCl | 9.90 | HC |
| SRR6502093 | root | 100 mM NaCl | 9.24 | HC |
| SRR6502094 | root | control | 9.16 | HC |
| SRR6502095 | root | control | 9.28 | HC |
| SRR6502096 | root | control | 8.18 | HC |
| SRR6502103 | root | 100 mM NaCl | 10.64 | HC |
| SRR6502104 | root | 100 mM NaCl | 9.42 | HC |
| SRR6502105 | root | 100 mM NaCl | 10.93 | HC |
| SRR6502106 | root | control | 8.89 | HC |
| SRR6502107 | root | control | 8.13 | HC |
| SRR6502108 | root | control | 8.49 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.29 | HC |
| SRR1740433 | root_elongation_zone | wt | 3.67 | HC |
| SRR6441554 | seedling | wild_type | 3.16 | HC |
| SRR6441555 | seedling | wild_type | 4.72 | HC |
| SRR2154086 | seedling | wt | 13.53 | HC |
| SRR2154085 | seedling | wt | 14.53 | HC |
| SRR2154087 | seedling | wt | 13.66 | HC |
| SRR3098741 | seedling | wt | 3.53 | HC |
| SRR3098742 | seedling | wt | 2.91 | HC |
| SRR3098743 | seedling | wt | 3.03 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.95 | HC |
| SRR1944583 | seedling | no_treatment | 6.10 | HC |
| SRR358792 | seedling | wt | 8.77 | HC |
| SRR358793 | seedling | wt | 10.31 | HC |
| SRR358794 | seedling | wt | 10.94 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 11.10 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 14.73 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.48 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.37 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.79 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.56 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.36 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.61 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.28 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.79 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.53 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 9.85 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 7.86 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.21 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 10.31 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 10.02 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 13.13 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 12.73 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 13.65 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 9.96 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 17.44 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 20.81 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.58 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.41 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.05 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.39 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.08 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.53 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.56 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.71 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.78 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.16 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.33 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.15 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.16 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.81 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.76 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.06 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.05 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.69 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 24.34 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 25.92 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 26.89 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 19.21 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 17.28 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 19.97 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 24.98 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 27.93 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 25.45 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 31.89 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 31.12 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 24.17 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 28.94 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 23.02 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 26.48 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 27.49 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 30.62 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 31.69 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 29.63 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 24.00 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 35.14 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 25.21 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 25.22 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 26.51 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 30.65 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 31.04 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 26.81 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 30.94 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 27.79 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 32.38 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 30.81 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 34.38 | HC |