| SRR5560729 | caryopsis | wild_type | 8.07 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 8.36 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 9.01 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 8.13 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 6.64 | HC |
| SRR7265403 | coleoptile | 2dN | 6.18 | HC |
| SRR7265404 | coleoptile | 2dN | 7.84 | HC |
| SRR7265405 | coleoptile | 2dN | 6.78 | HC |
| SRR7265410 | coleoptile | 3dN | 5.81 | HC |
| SRR7265411 | coleoptile | 3dN | 5.93 | HC |
| SRR7265416 | coleoptile | 4dN | 5.53 | HC |
| SRR7265417 | coleoptile | 4dN | 6.95 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 34.27 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 41.78 | HC |
| SRR7265392 | embryo | 12hN | 5.49 | HC |
| SRR7265393 | embryo | 12hN | 7.00 | HC |
| SRR7265396 | embryo | 24hA | 5.42 | HC |
| SRR7265398 | embryo | 24hN | 7.95 | HC |
| SRR7265399 | embryo | 24hN | 8.09 | HC |
| SRR1213690 | flower | wt(flower buds) | 7.92 | HC |
| SRR1213691 | flower | wt | 10.47 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 11.42 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.45 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.64 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 10.38 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.28 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.85 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.07 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 13.56 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 13.20 | HC |
| SRR6168973 | leaf | none (control) | 14.92 | HC |
| SRR6168974 | leaf | none (control) | 13.23 | HC |
| SRR6168975 | leaf | none (control) | 7.11 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 25.11 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 19.89 | HC |
| SRR6168980 | leaf | none (control) | 2.53 | HC |
| SRR6168981 | leaf | none (control) | 4.34 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 8.27 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.95 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 7.92 | HC |
| SRR8582889 | panicle | AM | 2.40 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.22 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.93 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.57 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.35 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 12.61 | HC |
| SRR5126147 | root | "mock,1_day" | 12.46 | HC |
| SRR5126148 | root | "mock,1_day" | 16.08 | HC |
| SRR5126149 | root | "mock,1_day" | 10.15 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.69 | HC |
| SRR5126153 | root | "mock,7_days" | 7.61 | HC |
| SRR5126155 | root | "mock,7_days" | 7.45 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 8.45 | HC |
| SRR5126169 | root | "mock,14_days" | 8.42 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 4.56 | HC |
| SRR6502091 | root | 100 mM NaCl | 11.86 | HC |
| SRR6502092 | root | 100 mM NaCl | 18.04 | HC |
| SRR6502093 | root | 100 mM NaCl | 10.90 | HC |
| SRR6502094 | root | control | 14.78 | HC |
| SRR6502095 | root | control | 14.65 | HC |
| SRR6502096 | root | control | 14.30 | HC |
| SRR6502103 | root | 100 mM NaCl | 14.85 | HC |
| SRR6502104 | root | 100 mM NaCl | 13.78 | HC |
| SRR6502105 | root | 100 mM NaCl | 21.19 | HC |
| SRR6502106 | root | control | 11.34 | HC |
| SRR6502107 | root | control | 11.49 | HC |
| SRR6502108 | root | control | 13.66 | HC |
| SRR1740434 | root_differentiation_zone | wt | 6.62 | HC |
| SRR1740435 | root_differentiation_zone | wt | 11.06 | HC |
| SRR1740436 | root_differentiation_zone | wt | 8.87 | HC |
| SRR1740431 | root_elongation_zone | wt | 26.84 | HC |
| SRR1740432 | root_elongation_zone | wt | 18.44 | HC |
| SRR1740433 | root_elongation_zone | wt | 24.95 | HC |
| SRR1740428 | root_meristematic_zone | wt | 27.80 | HC |
| SRR1740429 | root_meristematic_zone | wt | 16.69 | HC |
| SRR1740430 | root_meristematic_zone | wt | 16.66 | HC |
| SRR6441554 | seedling | wild_type | 9.22 | HC |
| SRR6441555 | seedling | wild_type | 9.94 | HC |
| SRR2154083 | seedling | wt | 7.14 | HC |
| SRR2154087 | seedling | wt | 5.54 | HC |
| SRR1944583 | seedling | no_treatment | 5.86 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 8.79 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 8.31 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.90 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 11.41 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 20.86 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.41 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.50 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.43 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.13 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.30 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.70 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.85 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.07 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.06 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.11 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.04 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.94 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 53.98 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 55.31 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 53.43 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 66.42 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 38.20 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 59.63 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 69.55 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 61.36 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 61.39 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 66.60 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 53.52 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 63.56 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 65.65 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 58.09 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 57.48 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 65.19 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 75.46 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 73.45 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 72.00 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 55.08 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 66.91 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 60.61 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 71.36 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 8.55 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 8.99 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 13.05 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 16.90 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 13.84 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 26.14 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 27.72 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 32.40 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 37.09 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 40.18 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 38.96 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 36.44 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 35.83 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 38.13 | HC |