| SRR5560728 | caryopsis | wild_type | 5.39 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.14 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 7.46 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 6.85 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.32 | HC |
| SRR8240824 | leaf | wild_type | 3.28 | HC |
| SRR8240826 | leaf | wild_type | 4.22 | HC |
| SRR8240819 | leaf | wild_type | 3.86 | HC |
| SRR8240820 | leaf | wild_type | 3.39 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.98 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.29 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.73 | HC |
| SRR504365 | leaf | wt | 4.60 | HC |
| SRR6417969 | leaf | H2O_control | 4.30 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.94 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.60 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.92 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.48 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.68 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 7.68 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 7.91 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.50 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.54 | HC |
| SRR1213692 | leaf | wt | 4.99 | HC |
| SRR1213693 | leaf | wt | 5.83 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.48 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.38 | HC |
| SRR6502089 | leaf | control | 4.40 | HC |
| SRR6502090 | leaf | control | 4.08 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 10.40 | HC |
| SRR6502100 | leaf | control | 4.81 | HC |
| SRR6168974 | leaf | none (control) | 18.30 | HC |
| SRR6168975 | leaf | none (control) | 14.50 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.39 | HC |
| SRR6168979 | leaf | none (control) | 3.86 | HC |
| SRR6168980 | leaf | none (control) | 2.83 | HC |
| SRR6168981 | leaf | none (control) | 7.10 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 8.69 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 12.96 | HC |
| SRR8582888 | panicle | AM | 13.02 | HC |
| SRR8582889 | panicle | AM | 18.02 | HC |
| SRR8582890 | panicle | AM | 10.65 | HC |
| SRR8582891 | panicle | PM | 21.57 | HC |
| SRR8582892 | panicle | PM | 11.70 | HC |
| SRR8582893 | panicle | PM | 32.83 | HC |
| SRR1633182 | panicle | WT | 10.63 | HC |
| SRR1633185 | panicle | WT | 14.98 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.60 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.89 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 5.25 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.95 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 11.16 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 17.52 | HC |
| SRR5126157 | root | "mock,7_days" | 6.37 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.60 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.75 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.14 | HC |
| SRR5126169 | root | "mock,14_days" | 7.19 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.53 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.12 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 10.04 | HC |
| SRR1213695 | root | wt | 4.50 | HC |
| SRR6441554 | seedling | wild_type | 7.76 | HC |
| SRR6441555 | seedling | wild_type | 10.47 | HC |
| SRR2154086 | seedling | wt | 9.59 | HC |
| SRR2154083 | seedling | wt | 4.10 | HC |
| SRR2154085 | seedling | wt | 5.49 | HC |
| SRR2154087 | seedling | wt | 19.64 | HC |
| SRR3098741 | seedling | wt | 3.72 | HC |
| SRR3098742 | seedling | wt | 4.75 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.32 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.62 | HC |
| SRR1944583 | seedling | no_treatment | 7.48 | HC |
| SRR358793 | seedling | wt | 8.02 | HC |
| SRR358794 | seedling | wt | 9.35 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 11.22 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 10.26 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.86 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 10.53 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.35 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.38 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.64 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.04 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.30 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.73 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.39 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 11.36 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 13.60 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 9.95 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 9.78 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 10.10 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 11.82 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.81 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.75 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.16 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.81 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.13 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.97 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.36 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.85 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.07 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.77 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.47 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 15.93 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.16 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.06 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.45 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 10.71 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 28.39 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 11.84 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 17.81 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 11.28 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 9.89 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 9.33 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 11.76 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 10.07 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 9.39 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 13.69 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 15.74 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 12.84 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.34 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 15.67 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 13.65 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 17.95 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 33.19 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 37.21 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 15.58 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 15.80 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 14.60 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 21.79 | HC |