| SRR5560727 | caryopsis | wild_type | 8.77 | HC |
| SRR5560728 | caryopsis | wild_type | 10.57 | HC |
| SRR5560729 | caryopsis | wild_type | 8.27 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.64 | HC |
| SRR2338868 | endosprem | high_temperature | 3.74 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.69 | HC |
| SRR4457235 | flag_leaf | DAH12 | 4.30 | HC |
| SRR4457236 | flag_leaf | DAH12 | 4.47 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.88 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.28 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.63 | HC |
| SRR8060835 | leaf | wild_type | 6.26 | HC |
| SRR8060836 | leaf | wild_type | 5.90 | HC |
| SRR8060837 | leaf | wild_type | 4.72 | HC |
| SRR8240824 | leaf | wild_type | 5.50 | HC |
| SRR8240825 | leaf | wild_type | 2.96 | HC |
| SRR8240826 | leaf | wild_type | 3.25 | HC |
| SRR8240818 | leaf | wild_type | 3.30 | HC |
| SRR8240819 | leaf | wild_type | 3.60 | HC |
| SRR8240820 | leaf | wild_type | 4.22 | HC |
| SRR6417968 | leaf | H2O_control | 3.97 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.73 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.30 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.09 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.28 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.36 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.40 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.87 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.39 | HC |
| SRR8611900 | leaf | Non-inoculated | 4.47 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.20 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.91 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.18 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.50 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.92 | HC |
| SRR1213692 | leaf | wt | 5.47 | HC |
| SRR1213693 | leaf | wt | 4.60 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.80 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 4.78 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.14 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 6.01 | HC |
| SRR6168973 | leaf | none (control) | 5.45 | HC |
| SRR6168975 | leaf | none (control) | 5.91 | HC |
| SRR6168981 | leaf | none (control) | 2.63 | HC |
| SRR8582888 | panicle | AM | 4.84 | HC |
| SRR8582889 | panicle | AM | 3.85 | HC |
| SRR8582890 | panicle | AM | 3.21 | HC |
| SRR8582891 | panicle | PM | 7.10 | HC |
| SRR8582893 | panicle | PM | 8.97 | HC |
| SRR5126149 | root | "mock,1_day" | 5.58 | HC |
| SRR5126153 | root | "mock,7_days" | 5.16 | HC |
| SRR5126155 | root | "mock,7_days" | 4.78 | HC |
| SRR5126157 | root | "mock,7_days" | 7.13 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.64 | HC |
| SRR5126169 | root | "mock,14_days" | 6.92 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.83 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.67 | HC |
| SRR1213695 | root | wt | 4.83 | HC |
| SRR2154082 | seedling | wt | 4.14 | HC |
| SRR2154085 | seedling | wt | 5.27 | HC |
| SRR3098741 | seedling | wt | 4.87 | HC |
| SRR3098742 | seedling | wt | 4.24 | HC |
| SRR3098743 | seedling | wt | 4.37 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.62 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.82 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.41 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.07 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.55 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.41 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.84 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 6.89 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 7.10 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 7.41 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 8.40 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 11.71 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 11.22 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 6.48 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 11.14 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 12.60 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.75 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.40 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.76 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.52 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.99 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.32 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.16 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.94 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.43 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.02 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.34 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 16.22 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 16.08 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 19.20 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.65 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 4.59 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.78 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.74 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 6.49 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 5.41 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 5.92 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 5.12 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.81 | HC |