| SRR3745125 | anther | wt | 6.76 | HC |
| SRR3745127 | anther | wt | 6.68 | HC |
| SRR358795 | callus | wt | 11.55 | HC |
| SRR6320473 | carpel | wt | 12.19 | HC |
| SRR5560727 | caryopsis | wild_type | 8.25 | HC |
| SRR5560728 | caryopsis | wild_type | 8.10 | HC |
| SRR5560729 | caryopsis | wild_type | 6.15 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 8.91 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 15.10 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 8.95 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 10.07 | HC |
| SRR7265400 | coleoptile | 2dA | 8.03 | HC |
| SRR7265401 | coleoptile | 2dA | 7.90 | HC |
| SRR7265402 | coleoptile | 2dA | 7.00 | HC |
| SRR7265403 | coleoptile | 2dN | 9.03 | HC |
| SRR7265404 | coleoptile | 2dN | 7.40 | HC |
| SRR7265405 | coleoptile | 2dN | 7.75 | HC |
| SRR7265406 | coleoptile | 3dA | 5.90 | HC |
| SRR7265407 | coleoptile | 3dA | 6.03 | HC |
| SRR7265409 | coleoptile | 3dN | 18.29 | HC |
| SRR7265410 | coleoptile | 3dN | 12.52 | HC |
| SRR7265411 | coleoptile | 3dN | 10.88 | HC |
| SRR7265413 | coleoptile | 4dA | 5.98 | HC |
| SRR7265414 | coleoptile | 4dA | 5.39 | HC |
| SRR7265415 | coleoptile | 4dN | 13.40 | HC |
| SRR7265416 | coleoptile | 4dN | 13.98 | HC |
| SRR7265417 | coleoptile | 4dN | 9.46 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 8.19 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 12.36 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 9.32 | HC |
| SRR7265373 | embryo | dry seed 0 h | 16.54 | HC |
| SRR7265374 | embryo | dry seed 0 h | 16.23 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.50 | HC |
| SRR7265376 | embryo | 1hA | 18.47 | HC |
| SRR7265377 | embryo | 1hA | 15.90 | HC |
| SRR7265378 | embryo | 1hA | 14.82 | HC |
| SRR7265379 | embryo | 1hN | 15.50 | HC |
| SRR7265380 | embryo | 1hN | 18.17 | HC |
| SRR7265381 | embryo | 1hN | 15.07 | HC |
| SRR7265382 | embryo | 3hA | 14.82 | HC |
| SRR7265383 | embryo | 3hA | 18.67 | HC |
| SRR7265384 | embryo | 3hA | 15.85 | HC |
| SRR7265385 | embryo | 3hN | 22.44 | HC |
| SRR7265386 | embryo | 3hN | 15.34 | HC |
| SRR7265387 | embryo | 3hN | 19.44 | HC |
| SRR7265388 | embryo | 12hA | 6.05 | HC |
| SRR7265389 | embryo | 12hA | 10.15 | HC |
| SRR7265390 | embryo | 12hA | 13.14 | HC |
| SRR7265391 | embryo | 12hN | 13.57 | HC |
| SRR7265392 | embryo | 12hN | 8.52 | HC |
| SRR7265393 | embryo | 12hN | 9.93 | HC |
| SRR7265394 | embryo | 24hA | 10.05 | HC |
| SRR7265395 | embryo | 24hA | 5.88 | HC |
| SRR7265396 | embryo | 24hA | 6.64 | HC |
| SRR7265397 | embryo | 24hN | 9.76 | HC |
| SRR7265398 | embryo | 24hN | 5.78 | HC |
| SRR7265399 | embryo | 24hN | 8.41 | HC |
| SRR2338867 | endosprem | control | 3.29 | HC |
| SRR2338869 | endosprem | high_temperature | 4.58 | HC |
| SRR1213690 | flower | wt(flower buds) | 15.37 | HC |
| SRR1213691 | flower | wt | 11.21 | HC |
| SRR8060835 | leaf | wild_type | 30.89 | HC |
| SRR8060836 | leaf | wild_type | 28.53 | HC |
| SRR8060837 | leaf | wild_type | 40.22 | HC |
| SRR8240824 | leaf | wild_type | 4.16 | HC |
| SRR8240826 | leaf | wild_type | 3.06 | HC |
| SRR8240818 | leaf | wild_type | 4.22 | HC |
| SRR8240819 | leaf | wild_type | 5.46 | HC |
| SRR8240820 | leaf | wild_type | 6.96 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.29 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 9.79 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.17 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 10.15 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.94 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.87 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.82 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.95 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.70 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.38 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.42 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.80 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.46 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 12.42 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.15 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.69 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.94 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.59 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.22 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.19 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.03 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.30 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 6.54 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 6.54 | HC |
| SRR1761528 | leaf | drought | 6.54 | HC |
| SRR504365 | leaf | wt | 15.45 | HC |
| SRR8611900 | leaf | Non-inoculated | 29.65 | HC |
| SRR8611901 | leaf | Non-inoculated | 30.33 | HC |
| SRR8611902 | leaf | Non-inoculated | 25.49 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 28.41 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 34.36 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 31.27 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 25.24 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 25.04 | HC |
| SRR1213692 | leaf | wt | 77.70 | HC |
| SRR1213693 | leaf | wt | 42.53 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 9.15 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 10.11 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 15.03 | HC |
| SRR6502088 | leaf | control | 10.89 | HC |
| SRR6502089 | leaf | control | 8.83 | HC |
| SRR6502090 | leaf | control | 9.93 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 14.77 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 11.81 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 7.45 | HC |
| SRR6502100 | leaf | control | 12.04 | HC |
| SRR6502101 | leaf | control | 10.47 | HC |
| SRR6502102 | leaf | control | 12.43 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 9.86 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 13.65 | HC |
| SRR6168973 | leaf | none (control) | 15.08 | HC |
| SRR6168974 | leaf | none (control) | 18.04 | HC |
| SRR6168975 | leaf | none (control) | 8.67 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.15 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 11.74 | HC |
| SRR6168981 | leaf | none (control) | 3.57 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 10.20 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 8.18 | HC |
| SRR8582891 | panicle | PM | 12.58 | HC |
| SRR8582892 | panicle | PM | 19.85 | HC |
| SRR8582893 | panicle | PM | 9.66 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.22 | HC |
| SRR5110437 | panicle | Dawn + 7h | 8.17 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 8.78 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 7.00 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 10.48 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 9.45 | HC |
| SRR5110445 | panicle | Dusk | 8.16 | HC |
| SRR5110446 | panicle | Dusk | 5.09 | HC |
| SRR5110448 | panicle | Dusk | 7.79 | HC |
| SRR5110457 | panicle | Dawn + 21h | 5.73 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 5.93 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.04 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 13.15 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.78 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.64 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.64 | HC |
| SRR5126165 | root | "mock,14_days" | 5.33 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.26 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 10.17 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 10.74 | HC |
| SRR1213695 | root | wt | 56.53 | HC |
| SRR6441554 | seedling | wild_type | 18.61 | HC |
| SRR6441555 | seedling | wild_type | 30.19 | HC |
| SRR2154086 | seedling | wt | 20.23 | HC |
| SRR2154082 | seedling | wt | 4.29 | HC |
| SRR2154083 | seedling | wt | 6.78 | HC |
| SRR2154084 | seedling | wt | 11.02 | HC |
| SRR2154085 | seedling | wt | 14.56 | HC |
| SRR2154087 | seedling | wt | 9.15 | HC |
| SRR3098742 | seedling | wt | 3.82 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.36 | HC |
| SRR2857721 | seedling | drought_stress_6h | 10.06 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.71 | HC |
| SRR1944583 | seedling | no_treatment | 7.47 | HC |
| SRR358791 | seedling | wt | 90.31 | HC |
| SRR358792 | seedling | wt | 84.16 | HC |
| SRR358793 | seedling | wt | 54.84 | HC |
| SRR358794 | seedling | wt | 47.12 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 28.45 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 24.20 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 22.12 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 18.46 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 16.02 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 15.46 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 30.06 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 19.62 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 53.49 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 28.33 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 7.50 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.37 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.35 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.77 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.30 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 13.80 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 18.01 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 11.74 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 12.20 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 14.52 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 15.11 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 23.33 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 27.97 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 28.00 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 29.56 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 25.77 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 24.39 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.33 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.49 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 30.00 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 32.14 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 84.87 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 57.54 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 34.19 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 56.06 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.43 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.57 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 9.12 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 10.43 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 7.21 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 12.14 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.17 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.72 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 8.21 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 6.88 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 9.08 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 10.89 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 8.33 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 5.47 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 7.06 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 7.19 | HC |