| SRR4457252 | 2nd_leaf | DAH12 | 5.94 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.99 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 5.26 | HC |
| SRR3745125 | anther | wt | 8.02 | HC |
| SRR6320473 | carpel | wt | 30.60 | HC |
| SRR6320498 | carpel | wt | 35.01 | HC |
| SRR5560728 | caryopsis | wild_type | 5.66 | HC |
| SRR5560729 | caryopsis | wild_type | 7.36 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 33.18 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 31.18 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 8.75 | HC |
| SRR4947495 | root | control | 6.86 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 22.13 | HC |
| SRR7265400 | coleoptile | 2dA | 38.24 | HC |
| SRR7265401 | coleoptile | 2dA | 39.39 | HC |
| SRR7265402 | coleoptile | 2dA | 35.79 | HC |
| SRR7265403 | coleoptile | 2dN | 42.01 | HC |
| SRR7265404 | coleoptile | 2dN | 32.36 | HC |
| SRR7265405 | coleoptile | 2dN | 35.85 | HC |
| SRR7265406 | coleoptile | 3dA | 35.48 | HC |
| SRR7265407 | coleoptile | 3dA | 34.06 | HC |
| SRR7265408 | coleoptile | 3dA | 21.18 | HC |
| SRR7265409 | coleoptile | 3dN | 56.26 | HC |
| SRR7265410 | coleoptile | 3dN | 43.94 | HC |
| SRR7265411 | coleoptile | 3dN | 45.58 | HC |
| SRR7265413 | coleoptile | 4dA | 8.67 | HC |
| SRR7265414 | coleoptile | 4dA | 5.23 | HC |
| SRR7265415 | coleoptile | 4dN | 40.58 | HC |
| SRR7265416 | coleoptile | 4dN | 35.71 | HC |
| SRR7265417 | coleoptile | 4dN | 37.53 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 27.93 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 28.45 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 26.18 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.35 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.44 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 9.27 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 7.72 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 6.80 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 4.07 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 6.06 | HC |
| SRR7265388 | embryo | 12hA | 34.17 | HC |
| SRR7265389 | embryo | 12hA | 34.79 | HC |
| SRR7265390 | embryo | 12hA | 32.15 | HC |
| SRR7265391 | embryo | 12hN | 48.32 | HC |
| SRR7265392 | embryo | 12hN | 38.03 | HC |
| SRR7265393 | embryo | 12hN | 43.45 | HC |
| SRR7265394 | embryo | 24hA | 47.93 | HC |
| SRR7265395 | embryo | 24hA | 42.58 | HC |
| SRR7265396 | embryo | 24hA | 40.56 | HC |
| SRR7265397 | embryo | 24hN | 46.78 | HC |
| SRR7265398 | embryo | 24hN | 33.72 | HC |
| SRR7265399 | embryo | 24hN | 35.60 | HC |
| SRR2338867 | endosprem | control | 3.68 | HC |
| SRR2338868 | endosprem | high_temperature | 3.08 | HC |
| SRR2338869 | endosprem | high_temperature | 3.44 | HC |
| SRR4457231 | flag_leaf | DAH4 | 3.80 | HC |
| SRR4457232 | flag_leaf | DAH4 | 6.37 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.17 | HC |
| SRR4457234 | flag_leaf | DAH12 | 8.26 | HC |
| SRR4457235 | flag_leaf | DAH12 | 10.12 | HC |
| SRR4457236 | flag_leaf | DAH12 | 10.52 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.54 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.79 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.29 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.84 | HC |
| SRR1213691 | flower | wt | 4.93 | HC |
| SRR8240826 | leaf | wild_type | 2.74 | HC |
| SRR8240818 | leaf | wild_type | 3.00 | HC |
| SRR8240819 | leaf | wild_type | 2.49 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.34 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.40 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.26 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.17 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.34 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.27 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.43 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.49 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.03 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.65 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 14.27 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.90 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.97 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.27 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.25 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 9.30 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 7.66 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 8.10 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.65 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.22 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.23 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.80 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.44 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 12.12 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.43 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.74 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.68 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.14 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 14.94 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.28 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.72 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.17 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.61 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 7.05 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 12.42 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.95 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 10.55 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 11.07 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 10.55 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 11.07 | HC |
| SRR1761530 | leaf | control | 10.55 | HC |
| SRR1761531 | leaf | control | 11.07 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.75 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.53 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.15 | HC |
| SRR6417967 | leaf | H2O_control | 8.59 | HC |
| SRR6417968 | leaf | H2O_control | 5.87 | HC |
| SRR6417969 | leaf | H2O_control | 4.60 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 16.32 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 17.86 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 9.27 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 8.06 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 12.20 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.01 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.84 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.49 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 7.16 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.30 | HC |
| SRR6502088 | leaf | control | 4.90 | HC |
| SRR6502089 | leaf | control | 5.98 | HC |
| SRR6502090 | leaf | control | 5.09 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 7.36 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.49 | HC |
| SRR6502100 | leaf | control | 6.33 | HC |
| SRR6502101 | leaf | control | 6.18 | HC |
| SRR6502102 | leaf | control | 7.07 | HC |
| SRR5856931 | leaf | salt | 2.13 | HC |
| SRR5856933 | leaf | control | 3.25 | HC |
| SRR5856935 | leaf | control | 4.92 | HC |
| SRR5856936 | leaf | salt | 3.40 | HC |
| SRR5856937 | leaf | salt | 2.90 | HC |
| SRR5856938 | leaf | salt | 3.64 | HC |
| SRR6168974 | leaf | none (control) | 7.12 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.84 | HC |
| SRR6168981 | leaf | none (control) | 8.94 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 15.63 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 10.85 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 13.28 | HC |
| SRR8582888 | panicle | AM | 7.33 | HC |
| SRR8582889 | panicle | AM | 2.88 | HC |
| SRR8582890 | panicle | AM | 5.19 | HC |
| SRR5110429 | panicle | Dawn | 5.98 | HC |
| SRR5110431 | panicle | Dawn | 5.52 | HC |
| SRR5110432 | panicle | Dawn | 5.66 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.71 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 6.79 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.61 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 6.20 | HC |
| SRR5110438 | panicle | Dawn + 7h | 6.01 | HC |
| SRR5110440 | panicle | Dawn + 7h | 6.79 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.50 | HC |
| SRR5110446 | panicle | Dusk | 4.50 | HC |
| SRR5110448 | panicle | Dusk | 7.10 | HC |
| SRR5110451 | panicle | Dawn + 14h | 3.86 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.67 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.52 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.80 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.84 | HC |
| SRR5110459 | panicle | Dawn + 21h | 5.65 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.71 | HC |
| SRR1633182 | panicle | WT | 41.47 | HC |
| SRR1633185 | panicle | WT | 62.79 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.38 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.95 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 10.82 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 13.19 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 22.00 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 19.05 | HC |
| SRR5126147 | root | "mock,1_day" | 10.89 | HC |
| SRR5126148 | root | "mock,1_day" | 12.07 | HC |
| SRR5126149 | root | "mock,1_day" | 12.11 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 12.12 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 7.96 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.75 | HC |
| SRR5126153 | root | "mock,7_days" | 12.20 | HC |
| SRR5126155 | root | "mock,7_days" | 10.61 | HC |
| SRR5126157 | root | "mock,7_days" | 13.50 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.34 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.17 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.48 | HC |
| SRR5126165 | root | "mock,14_days" | 10.52 | HC |
| SRR5126167 | root | "mock,14_days" | 6.22 | HC |
| SRR5126169 | root | "mock,14_days" | 10.55 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.29 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.42 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.52 | HC |
| SRR4947478 | root | control | 5.60 | HC |
| SRR4947481 | root | control | 9.17 | HC |
| SRR4947482 | root | Al | 4.02 | HC |
| SRR4947483 | root | Al | 4.52 | HC |
| SRR4947484 | root | Al | 5.85 | HC |
| SRR4947488 | root | control | 4.96 | HC |
| SRR4947489 | root | control | 6.23 | HC |
| SRR4947490 | root | Al | 7.29 | HC |
| SRR4947491 | root | Al | 6.29 | HC |
| SRR4947492 | root | Al | 11.56 | HC |
| SRR4947493 | root | Al | 5.12 | HC |
| SRR4947494 | root | control | 4.98 | HC |
| SRR4947498 | root | Al | 7.01 | HC |
| SRR4947499 | root | Al | 6.65 | HC |
| SRR4947500 | root | Al | 12.36 | HC |
| SRR4947501 | root | Al | 10.89 | HC |
| SRR4947502 | root | control | 6.05 | HC |
| SRR4947503 | root | control | 5.79 | HC |
| SRR4947504 | root | control | 8.91 | HC |
| SRR4947505 | root | control | 9.12 | HC |
| SRR4947506 | root | Al | 4.17 | HC |
| SRR4947507 | root | Al | 7.14 | HC |
| SRR4947508 | root | Al | 6.83 | HC |
| SRR4947509 | root | Al | 7.92 | HC |
| SRR6502091 | root | 100 mM NaCl | 12.42 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.87 | HC |
| SRR6502093 | root | 100 mM NaCl | 12.79 | HC |
| SRR6502094 | root | control | 5.83 | HC |
| SRR6502095 | root | control | 7.02 | HC |
| SRR6502096 | root | control | 5.33 | HC |
| SRR6502103 | root | 100 mM NaCl | 12.63 | HC |
| SRR6502104 | root | 100 mM NaCl | 10.02 | HC |
| SRR6502105 | root | 100 mM NaCl | 10.10 | HC |
| SRR6502106 | root | control | 7.23 | HC |
| SRR6502107 | root | control | 7.95 | HC |
| SRR6502108 | root | control | 8.22 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.24 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.22 | HC |
| SRR1740431 | root_elongation_zone | wt | 6.07 | HC |
| SRR1740432 | root_elongation_zone | wt | 20.73 | HC |
| SRR1740433 | root_elongation_zone | wt | 16.34 | HC |
| SRR1740428 | root_meristematic_zone | wt | 8.32 | HC |
| SRR1740429 | root_meristematic_zone | wt | 7.74 | HC |
| SRR1740430 | root_meristematic_zone | wt | 11.22 | HC |
| SRR2154082 | seedling | wt | 3.86 | HC |
| SRR3098741 | seedling | wt | 3.34 | HC |
| SRR3098742 | seedling | wt | 4.27 | HC |
| SRR3098743 | seedling | wt | 3.09 | HC |
| SRR2857719 | seedling | drought_stress_0h | 15.18 | HC |
| SRR2857720 | seedling | drought_stress_1h | 9.67 | HC |
| SRR2857721 | seedling | drought_stress_6h | 11.10 | HC |
| SRR1944583 | seedling | no_treatment | 7.03 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.44 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.61 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.44 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.25 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.55 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.32 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.86 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.75 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.56 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.47 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.53 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.40 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.89 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.98 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.23 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 9.01 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.94 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.55 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 6.93 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 6.20 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.51 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.13 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 9.94 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 6.36 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.50 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.08 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.74 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.62 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.60 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.98 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.43 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.04 | HC |