| SRR4457263 | 2nd_leaf | DAH36 | 5.47 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 15.06 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 11.86 | HC |
| SRR976168 | flag_leaf | wild_type | 8.52 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.77 | HC |
| SRR1213691 | flower | wt | 5.44 | HC |
| SRR8240825 | leaf | wild_type | 3.07 | HC |
| SRR8240826 | leaf | wild_type | 5.86 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.49 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.03 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.53 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.92 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.03 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.23 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.57 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.67 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.50 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 6.43 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 8.00 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 6.43 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 8.00 | HC |
| SRR1761528 | leaf | drought | 6.43 | HC |
| SRR1761529 | leaf | drought | 8.00 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.72 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.90 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.47 | HC |
| SRR6417967 | leaf | H2O_control | 4.89 | HC |
| SRR6417968 | leaf | H2O_control | 8.89 | HC |
| SRR6417969 | leaf | H2O_control | 7.62 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 7.10 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 6.93 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 4.93 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 5.47 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.30 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.80 | HC |
| SRR8611900 | leaf | Non-inoculated | 8.07 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.60 | HC |
| SRR8611902 | leaf | Non-inoculated | 7.42 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.55 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.12 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.65 | HC |
| SRR1213692 | leaf | wt | 4.82 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.31 | HC |
| SRR6168973 | leaf | none (control) | 6.91 | HC |
| SRR6168974 | leaf | none (control) | 6.43 | HC |
| SRR6168979 | leaf | none (control) | 4.83 | HC |
| SRR6168980 | leaf | none (control) | 2.22 | HC |
| SRR6168981 | leaf | none (control) | 4.41 | HC |
| SRR8582888 | panicle | AM | 10.90 | HC |
| SRR8582889 | panicle | AM | 9.64 | HC |
| SRR8582890 | panicle | AM | 8.72 | HC |
| SRR1633182 | panicle | WT | 38.77 | HC |
| SRR1633185 | panicle | WT | 29.73 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.53 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.30 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.62 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 7.50 | HC |
| SRR5126153 | root | "mock,7_days" | 5.22 | HC |
| SRR5126155 | root | "mock,7_days" | 5.60 | HC |
| SRR5126167 | root | "mock,14_days" | 5.38 | HC |
| SRR5126169 | root | "mock,14_days" | 7.41 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.65 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.30 | HC |
| SRR1213694 | root | wt | 6.03 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.83 | HC |
| SRR3098742 | seedling | wt | 3.04 | HC |
| SRR3098743 | seedling | wt | 3.79 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.65 | HC |
| SRR1944583 | seedling | no_treatment | 8.94 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 8.24 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.65 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.25 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 10.08 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.26 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.70 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.83 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 10.41 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 7.05 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 7.27 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 14.02 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 8.04 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 11.05 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 14.79 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 14.97 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 12.51 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 11.53 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 9.91 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 11.02 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.49 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.87 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.55 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.53 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.65 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.01 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.11 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.21 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.28 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.20 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.24 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.37 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.52 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.56 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.84 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.55 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.22 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.13 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 8.51 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 13.08 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 9.72 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 13.88 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 15.63 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 16.87 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 13.18 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 20.00 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 21.51 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 28.83 | HC |