| SRR358797 | callus | wt | 33.63 | HC |
| SRR358798 | callus | wt | 33.46 | HC |
| SRR4947495 | root | control | 16.10 | HC |
| SRR7265400 | coleoptile | 2dA | 9.10 | HC |
| SRR7265403 | coleoptile | 2dN | 5.08 | HC |
| SRR7265406 | coleoptile | 3dA | 7.67 | HC |
| SRR7265407 | coleoptile | 3dA | 5.00 | HC |
| SRR7265409 | coleoptile | 3dN | 7.11 | HC |
| SRR7265411 | coleoptile | 3dN | 6.50 | HC |
| SRR7265412 | coleoptile | 4dA | 5.30 | HC |
| SRR7265413 | coleoptile | 4dA | 8.70 | HC |
| SRR7265417 | coleoptile | 4dN | 4.84 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 9.17 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.91 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.22 | HC |
| SRR7265373 | embryo | dry seed 0 h | 9.45 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.11 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.56 | HC |
| SRR7265376 | embryo | 1hA | 10.04 | HC |
| SRR7265377 | embryo | 1hA | 4.50 | HC |
| SRR7265378 | embryo | 1hA | 5.29 | HC |
| SRR7265379 | embryo | 1hN | 6.77 | HC |
| SRR7265380 | embryo | 1hN | 9.12 | HC |
| SRR7265381 | embryo | 1hN | 14.45 | HC |
| SRR7265385 | embryo | 3hN | 7.87 | HC |
| SRR7265389 | embryo | 12hA | 8.45 | HC |
| SRR7265393 | embryo | 12hN | 5.09 | HC |
| SRR7265394 | embryo | 24hA | 5.63 | HC |
| SRR7265395 | embryo | 24hA | 10.45 | HC |
| SRR7265396 | embryo | 24hA | 15.42 | HC |
| SRR7265397 | embryo | 24hN | 7.83 | HC |
| SRR976168 | flag_leaf | wild_type | 12.17 | HC |
| SRR1213690 | flower | wt(flower buds) | 3.91 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.59 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.26 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 4.74 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.30 | HC |
| SRR6502101 | leaf | control | 5.79 | HC |
| SRR5856929 | leaf | control | 3.10 | HC |
| SRR5856934 | leaf | control | 4.40 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 13.78 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 3.31 | HC |
| SRR6168979 | leaf | none (control) | 3.31 | HC |
| SRR6168981 | leaf | none (control) | 5.99 | HC |
| SRR5110430 | panicle | Dawn | 5.84 | HC |
| SRR5110431 | panicle | Dawn | 10.88 | HC |
| SRR4947496 | root | control | 8.02 | HC |
| SRR5110437 | panicle | Dawn + 7h | 4.38 | HC |
| SRR5110439 | panicle | Dawn + 7h | 6.03 | HC |
| SRR5110446 | panicle | Dusk | 18.33 | HC |
| SRR5110451 | panicle | Dawn + 14h | 7.25 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.96 | HC |
| SRR5110460 | panicle | Dawn + 21h | 4.83 | HC |
| SRR1633182 | panicle | WT | 91.30 | HC |
| SRR1633185 | panicle | WT | 123.64 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 16.53 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.04 | HC |
| SRR1213694 | root | wt | 16.45 | HC |
| SRR1213695 | root | wt | 3.95 | HC |
| SRR4947478 | root | control | 18.66 | HC |
| SRR4947479 | root | control | 10.07 | HC |
| SRR4947480 | root | control | 9.15 | HC |
| SRR4947481 | root | control | 8.30 | HC |
| SRR4947482 | root | Al | 15.12 | HC |
| SRR4947483 | root | Al | 23.45 | HC |
| SRR4947484 | root | Al | 13.05 | HC |
| SRR4947485 | root | Al | 7.81 | HC |
| SRR4947487 | root | control | 5.79 | HC |
| SRR4947488 | root | control | 7.65 | HC |
| SRR4947489 | root | control | 11.56 | HC |
| SRR4947490 | root | Al | 21.62 | HC |
| SRR4947491 | root | Al | 20.51 | HC |
| SRR4947492 | root | Al | 9.16 | HC |
| SRR4947493 | root | Al | 8.93 | HC |
| SRR4947494 | root | control | 31.26 | HC |
| SRR4947498 | root | Al | 54.71 | HC |
| SRR4947499 | root | Al | 20.09 | HC |
| SRR4947500 | root | Al | 9.86 | HC |
| SRR4947501 | root | Al | 11.10 | HC |
| SRR4947502 | root | control | 20.55 | HC |
| SRR4947503 | root | control | 13.68 | HC |
| SRR4947504 | root | control | 12.05 | HC |
| SRR4947505 | root | control | 9.24 | HC |
| SRR4947506 | root | Al | 11.38 | HC |
| SRR4947507 | root | Al | 28.31 | HC |
| SRR4947508 | root | Al | 9.78 | HC |
| SRR4947509 | root | Al | 8.91 | HC |
| SRR6502094 | root | control | 12.95 | HC |
| SRR6502095 | root | control | 23.51 | HC |
| SRR6502103 | root | 100 mM NaCl | 7.04 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.68 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.58 | HC |
| SRR6502107 | root | control | 5.06 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.11 | HC |
| SRR6441555 | seedling | wild_type | 3.24 | HC |
| SRR358792 | seedling | wt | 20.30 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 17.12 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 6.84 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.46 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 15.12 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.17 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 12.94 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.80 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 16.81 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 13.76 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 15.70 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 18.65 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 14.38 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 15.12 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 10.18 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 11.92 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 12.56 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 9.57 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 14.16 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 15.72 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.26 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.97 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 19.65 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 16.59 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 17.55 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 11.35 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 20.41 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.66 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.31 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 8.75 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 4.65 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 4.16 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.63 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.23 | HC |