| SRR5560729 | caryopsis | wild_type | 5.83 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 9.00 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.76 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.71 | HC |
| SRR7265400 | coleoptile | 2dA | 19.75 | HC |
| SRR7265401 | coleoptile | 2dA | 15.96 | HC |
| SRR7265402 | coleoptile | 2dA | 17.31 | HC |
| SRR7265403 | coleoptile | 2dN | 11.73 | HC |
| SRR7265404 | coleoptile | 2dN | 10.56 | HC |
| SRR7265405 | coleoptile | 2dN | 10.87 | HC |
| SRR7265406 | coleoptile | 3dA | 16.59 | HC |
| SRR7265407 | coleoptile | 3dA | 16.69 | HC |
| SRR7265408 | coleoptile | 3dA | 12.01 | HC |
| SRR7265409 | coleoptile | 3dN | 12.19 | HC |
| SRR7265410 | coleoptile | 3dN | 8.40 | HC |
| SRR7265411 | coleoptile | 3dN | 9.62 | HC |
| SRR7265412 | coleoptile | 4dA | 9.07 | HC |
| SRR7265413 | coleoptile | 4dA | 14.86 | HC |
| SRR7265414 | coleoptile | 4dA | 12.16 | HC |
| SRR7265415 | coleoptile | 4dN | 7.51 | HC |
| SRR7265416 | coleoptile | 4dN | 6.30 | HC |
| SRR7265417 | coleoptile | 4dN | 8.28 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 19.13 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 17.00 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 20.50 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 4.00 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.65 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.38 | HC |
| SRR7265374 | embryo | dry seed 0 h | 4.67 | HC |
| SRR7265376 | embryo | 1hA | 4.95 | HC |
| SRR7265377 | embryo | 1hA | 5.79 | HC |
| SRR7265378 | embryo | 1hA | 6.02 | HC |
| SRR7265379 | embryo | 1hN | 3.78 | HC |
| SRR7265381 | embryo | 1hN | 4.91 | HC |
| SRR7265382 | embryo | 3hA | 9.11 | HC |
| SRR7265383 | embryo | 3hA | 7.08 | HC |
| SRR7265384 | embryo | 3hA | 6.14 | HC |
| SRR7265385 | embryo | 3hN | 6.23 | HC |
| SRR7265386 | embryo | 3hN | 4.60 | HC |
| SRR7265387 | embryo | 3hN | 4.85 | HC |
| SRR7265388 | embryo | 12hA | 12.30 | HC |
| SRR7265389 | embryo | 12hA | 13.44 | HC |
| SRR7265390 | embryo | 12hA | 9.75 | HC |
| SRR7265391 | embryo | 12hN | 8.88 | HC |
| SRR7265392 | embryo | 12hN | 7.16 | HC |
| SRR7265393 | embryo | 12hN | 9.37 | HC |
| SRR7265394 | embryo | 24hA | 17.76 | HC |
| SRR7265395 | embryo | 24hA | 15.66 | HC |
| SRR7265396 | embryo | 24hA | 18.61 | HC |
| SRR7265397 | embryo | 24hN | 17.45 | HC |
| SRR7265398 | embryo | 24hN | 10.61 | HC |
| SRR7265399 | embryo | 24hN | 11.54 | HC |
| SRR8240824 | leaf | wild_type | 8.58 | HC |
| SRR8240825 | leaf | wild_type | 5.85 | HC |
| SRR8240818 | leaf | wild_type | 8.50 | HC |
| SRR8240819 | leaf | wild_type | 9.21 | HC |
| SRR8240820 | leaf | wild_type | 5.70 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.16 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 8.86 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.45 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.89 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.21 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.54 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.03 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.55 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 5.38 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.69 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.68 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.34 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 6.05 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 7.07 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.63 | HC |
| SRR6502100 | leaf | control | 4.73 | HC |
| SRR6168979 | leaf | none (control) | 3.51 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.83 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.24 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.52 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 8.49 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 6.33 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.37 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.61 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 7.10 | HC |
| SRR5126147 | root | "mock,1_day" | 8.59 | HC |
| SRR5126149 | root | "mock,1_day" | 5.75 | HC |
| SRR5126153 | root | "mock,7_days" | 16.18 | HC |
| SRR5126155 | root | "mock,7_days" | 13.10 | HC |
| SRR5126157 | root | "mock,7_days" | 6.37 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.75 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 8.13 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.46 | HC |
| SRR5126165 | root | "mock,14_days" | 12.38 | HC |
| SRR5126167 | root | "mock,14_days" | 9.66 | HC |
| SRR5126169 | root | "mock,14_days" | 8.66 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.22 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.24 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 4.10 | HC |
| SRR4947501 | root | Al | 6.33 | HC |
| SRR6502091 | root | 100 mM NaCl | 8.52 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.94 | HC |
| SRR6502093 | root | 100 mM NaCl | 9.70 | HC |
| SRR6502094 | root | control | 6.99 | HC |
| SRR6502095 | root | control | 8.09 | HC |
| SRR6502096 | root | control | 8.50 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.38 | HC |
| SRR6502104 | root | 100 mM NaCl | 9.61 | HC |
| SRR6502105 | root | 100 mM NaCl | 10.57 | HC |
| SRR6502106 | root | control | 9.85 | HC |
| SRR6502107 | root | control | 9.02 | HC |
| SRR6502108 | root | control | 11.61 | HC |
| SRR1740435 | root_differentiation_zone | wt | 8.35 | HC |
| SRR1740436 | root_differentiation_zone | wt | 12.77 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.05 | HC |
| SRR1740433 | root_elongation_zone | wt | 3.67 | HC |
| SRR3098741 | seedling | wt | 4.03 | HC |
| SRR3098742 | seedling | wt | 3.69 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.43 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.08 | HC |
| SRR358792 | seedling | wt | 9.63 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 12.30 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 11.56 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 21.19 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 20.68 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 20.39 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.53 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 16.48 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 12.94 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.21 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 15.07 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 19.92 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 6.07 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.11 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.53 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.55 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.10 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 15.93 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 15.30 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 8.91 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 11.07 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.32 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.25 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.47 | HC |