| SRR4457253 | 2nd_leaf | DAH12 | 4.37 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 4.30 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 21.38 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 12.36 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 39.17 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 8.43 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 12.19 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 20.73 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 9.40 | HC |
| SRR5560727 | caryopsis | wild_type | 10.35 | HC |
| SRR5560728 | caryopsis | wild_type | 10.15 | HC |
| SRR5560729 | caryopsis | wild_type | 6.55 | HC |
| SRR7265412 | coleoptile | 4dA | 10.79 | HC |
| SRR7265413 | coleoptile | 4dA | 17.15 | HC |
| SRR7265414 | coleoptile | 4dA | 12.59 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 6.00 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 9.34 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 12.14 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 8.90 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.71 | HC |
| SRR976168 | flag_leaf | wild_type | 90.02 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.42 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.71 | HC |
| SRR8240824 | leaf | wild_type | 5.32 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 9.31 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 10.31 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 9.13 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 8.01 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.18 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 97.31 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 59.88 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 67.70 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 92.61 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 62.99 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 32.38 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 57.54 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 75.46 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 19.55 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 40.36 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 45.10 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 51.68 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 87.84 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 7.58 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 76.37 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 23.84 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 16.82 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 46.70 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 28.58 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 56.94 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 64.69 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 39.91 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 14.99 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.38 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.29 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 34.19 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 18.50 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 54.66 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 33.36 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.03 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 84.39 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 18.28 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 84.39 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 18.28 | HC |
| SRR1761528 | leaf | drought | 84.39 | HC |
| SRR1761529 | leaf | drought | 18.28 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 16.85 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 25.03 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.66 | HC |
| SRR6417968 | leaf | H2O_control | 3.91 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 54.23 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 80.69 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 19.05 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 67.93 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 55.91 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 25.60 | HC |
| SRR8611900 | leaf | Non-inoculated | 14.80 | HC |
| SRR8611901 | leaf | Non-inoculated | 14.36 | HC |
| SRR8611902 | leaf | Non-inoculated | 13.77 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 25.89 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 32.41 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 27.85 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.33 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.44 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 11.20 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 10.37 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.76 | HC |
| SRR6502088 | leaf | control | 5.52 | HC |
| SRR6502089 | leaf | control | 6.15 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.66 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 53.17 | HC |
| SRR6168979 | leaf | none (control) | 9.92 | HC |
| SRR6168980 | leaf | none (control) | 24.88 | HC |
| SRR6168981 | leaf | none (control) | 35.72 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 79.90 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 17.47 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 41.68 | HC |
| SRR5110431 | panicle | Dawn | 4.78 | HC |
| SRR4947496 | root | control | 15.98 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.59 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.78 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.44 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 62.63 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 65.83 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 33.85 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 32.12 | HC |
| SRR5126147 | root | "mock,1_day" | 51.54 | HC |
| SRR5126148 | root | "mock,1_day" | 35.48 | HC |
| SRR5126149 | root | "mock,1_day" | 59.62 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 22.25 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 16.74 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 14.48 | HC |
| SRR5126153 | root | "mock,7_days" | 94.82 | HC |
| SRR5126155 | root | "mock,7_days" | 94.52 | HC |
| SRR5126157 | root | "mock,7_days" | 116.19 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.73 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.09 | HC |
| SRR5126165 | root | "mock,14_days" | 76.13 | HC |
| SRR5126167 | root | "mock,14_days" | 31.76 | HC |
| SRR5126169 | root | "mock,14_days" | 85.49 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.75 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 12.10 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 12.34 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 15.32 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 12.18 | HC |
| SRR4947480 | root | control | 16.20 | HC |
| SRR4947481 | root | control | 13.64 | HC |
| SRR4947484 | root | Al | 15.31 | HC |
| SRR4947485 | root | Al | 14.32 | HC |
| SRR4947488 | root | control | 10.58 | HC |
| SRR4947489 | root | control | 11.62 | HC |
| SRR4947492 | root | Al | 17.97 | HC |
| SRR4947493 | root | Al | 8.52 | HC |
| SRR4947497 | root | control | 20.83 | HC |
| SRR4947500 | root | Al | 16.88 | HC |
| SRR4947501 | root | Al | 10.55 | HC |
| SRR4947504 | root | control | 15.08 | HC |
| SRR4947505 | root | control | 10.92 | HC |
| SRR4947508 | root | Al | 19.33 | HC |
| SRR4947509 | root | Al | 13.47 | HC |
| SRR6502091 | root | 100 mM NaCl | 19.66 | HC |
| SRR6502093 | root | 100 mM NaCl | 20.06 | HC |
| SRR6502094 | root | control | 19.80 | HC |
| SRR6502095 | root | control | 25.44 | HC |
| SRR6502096 | root | control | 31.03 | HC |
| SRR6502103 | root | 100 mM NaCl | 25.25 | HC |
| SRR6502104 | root | 100 mM NaCl | 17.95 | HC |
| SRR6502105 | root | 100 mM NaCl | 18.02 | HC |
| SRR6502106 | root | control | 20.81 | HC |
| SRR6502107 | root | control | 16.44 | HC |
| SRR6502108 | root | control | 11.31 | HC |
| SRR1740434 | root_differentiation_zone | wt | 8.01 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.97 | HC |
| SRR1740436 | root_differentiation_zone | wt | 9.10 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.26 | HC |
| SRR3098741 | seedling | wt | 4.17 | HC |
| SRR2857719 | seedling | drought_stress_0h | 35.39 | HC |
| SRR2857720 | seedling | drought_stress_1h | 16.72 | HC |
| SRR2857721 | seedling | drought_stress_6h | 25.46 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 18.15 | HC |
| SRR1944583 | seedling | no_treatment | 17.70 | HC |
| SRR358791 | seedling | wt | 11.20 | HC |
| SRR358792 | seedling | wt | 11.24 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 11.75 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.23 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 41.35 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 16.87 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 61.09 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 12.39 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 40.08 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 42.50 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.20 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.66 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.96 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 12.29 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 15.77 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.72 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 18.54 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 10.09 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 11.41 | HC |