| SRR358795 | callus | wt | 14.18 | HC |
| SRR358796 | callus | wt | 15.50 | HC |
| SRR358797 | callus | wt | 17.37 | HC |
| SRR358798 | callus | wt | 16.91 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.47 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.63 | HC |
| SRR4947495 | root | control | 7.37 | HC |
| SRR7265402 | coleoptile | 2dA | 7.09 | HC |
| SRR7265406 | coleoptile | 3dA | 5.10 | HC |
| SRR7265414 | coleoptile | 4dA | 9.53 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.41 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.99 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 7.24 | HC |
| SRR7265373 | embryo | dry seed 0 h | 8.68 | HC |
| SRR7265374 | embryo | dry seed 0 h | 15.16 | HC |
| SRR7265375 | embryo | dry seed 0 h | 6.33 | HC |
| SRR7265376 | embryo | 1hA | 4.94 | HC |
| SRR7265379 | embryo | 1hN | 6.60 | HC |
| SRR7265384 | embryo | 3hA | 5.48 | HC |
| SRR7265389 | embryo | 12hA | 6.25 | HC |
| SRR7265390 | embryo | 12hA | 10.52 | HC |
| SRR7265394 | embryo | 24hA | 7.81 | HC |
| SRR2338867 | endosprem | control | 3.91 | HC |
| SRR2338868 | endosprem | high_temperature | 4.32 | HC |
| SRR976168 | flag_leaf | wild_type | 3.37 | HC |
| SRR1213691 | flower | wt | 8.14 | HC |
| SRR8060835 | leaf | wild_type | 9.60 | HC |
| SRR8060837 | leaf | wild_type | 7.59 | HC |
| SRR8240820 | leaf | wild_type | 5.47 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.99 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.08 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.21 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.77 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.85 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.72 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.65 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.17 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.59 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.63 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.04 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.17 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.33 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.35 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.96 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.06 | HC |
| SRR6417969 | leaf | H2O_control | 4.86 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.28 | HC |
| SRR1213692 | leaf | wt | 4.77 | HC |
| SRR1213693 | leaf | wt | 3.99 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.82 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.06 | HC |
| SRR6502102 | leaf | control | 4.85 | HC |
| SRR6168974 | leaf | none (control) | 6.35 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.42 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.69 | HC |
| SRR8582888 | panicle | AM | 3.43 | HC |
| SRR8582890 | panicle | AM | 4.62 | HC |
| SRR8582891 | panicle | PM | 9.74 | HC |
| SRR5110429 | panicle | Dawn | 10.90 | HC |
| SRR5110431 | panicle | Dawn | 6.66 | HC |
| SRR5110432 | panicle | Dawn | 9.77 | HC |
| SRR4947496 | root | control | 9.28 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.98 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 5.74 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.42 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.37 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 8.61 | HC |
| SRR5110445 | panicle | Dusk | 7.02 | HC |
| SRR5110446 | panicle | Dusk | 11.15 | HC |
| SRR5110447 | panicle | Dusk | 8.16 | HC |
| SRR5110448 | panicle | Dusk | 9.23 | HC |
| SRR5110449 | panicle | Dawn + 14h | 7.65 | HC |
| SRR5110450 | panicle | Dawn + 14h | 7.71 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.06 | HC |
| SRR5110452 | panicle | Dawn + 14h | 10.24 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 7.99 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 7.93 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 11.38 | HC |
| SRR5110457 | panicle | Dawn + 21h | 7.15 | HC |
| SRR5110458 | panicle | Dawn + 21h | 5.29 | HC |
| SRR5110459 | panicle | Dawn + 21h | 11.44 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 5.74 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 6.33 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.20 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.15 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 8.99 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.53 | HC |
| SRR4947478 | root | control | 5.73 | HC |
| SRR4947479 | root | control | 5.69 | HC |
| SRR4947480 | root | control | 8.33 | HC |
| SRR4947481 | root | control | 8.35 | HC |
| SRR4947483 | root | Al | 6.81 | HC |
| SRR4947484 | root | Al | 15.37 | HC |
| SRR4947485 | root | Al | 16.32 | HC |
| SRR4947487 | root | control | 8.16 | HC |
| SRR4947488 | root | control | 13.16 | HC |
| SRR4947489 | root | control | 12.29 | HC |
| SRR4947492 | root | Al | 7.06 | HC |
| SRR4947493 | root | Al | 13.07 | HC |
| SRR4947497 | root | control | 13.21 | HC |
| SRR4947500 | root | Al | 12.40 | HC |
| SRR4947503 | root | control | 7.26 | HC |
| SRR4947505 | root | control | 19.36 | HC |
| SRR4947506 | root | Al | 4.78 | HC |
| SRR4947507 | root | Al | 8.10 | HC |
| SRR4947508 | root | Al | 15.28 | HC |
| SRR4947509 | root | Al | 11.34 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.36 | HC |
| SRR6502093 | root | 100 mM NaCl | 10.63 | HC |
| SRR6502094 | root | control | 8.32 | HC |
| SRR6502095 | root | control | 8.09 | HC |
| SRR6502096 | root | control | 5.91 | HC |
| SRR6502104 | root | 100 mM NaCl | 10.36 | HC |
| SRR6502106 | root | control | 7.35 | HC |
| SRR6502107 | root | control | 10.29 | HC |
| SRR6502108 | root | control | 5.08 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.48 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.52 | HC |
| SRR1740433 | root_elongation_zone | wt | 5.99 | HC |
| SRR1740428 | root_meristematic_zone | wt | 6.48 | HC |
| SRR1740429 | root_meristematic_zone | wt | 8.47 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.28 | HC |
| SRR1944583 | seedling | no_treatment | 5.85 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.45 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.56 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.52 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.31 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.41 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.06 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.01 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.72 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.94 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.20 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 18.47 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 18.54 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 17.94 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 17.68 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 15.62 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 8.16 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 15.07 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 21.20 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 18.84 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 20.39 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 18.09 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 13.64 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 19.58 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 17.67 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 20.74 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 18.63 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 20.81 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 14.26 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 12.14 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 13.10 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 14.97 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.56 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 10.18 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.95 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.56 | HC |