| SRR4457263 | 2nd_leaf | DAH36 | 11.60 | HC |
| SRR3745125 | anther | wt | 12.06 | HC |
| SRR3745126 | anther | wt | 12.66 | HC |
| SRR358795 | callus | wt | 55.54 | HC |
| SRR358796 | callus | wt | 68.96 | HC |
| SRR6320473 | carpel | wt | 12.67 | HC |
| SRR6320498 | carpel | wt | 7.17 | HC |
| SRR5560729 | caryopsis | wild_type | 8.81 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 7.55 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.36 | HC |
| SRR4947495 | root | control | 5.20 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.20 | HC |
| SRR7265400 | coleoptile | 2dA | 7.85 | HC |
| SRR7265401 | coleoptile | 2dA | 8.23 | HC |
| SRR7265402 | coleoptile | 2dA | 51.15 | HC |
| SRR7265406 | coleoptile | 3dA | 9.27 | HC |
| SRR7265407 | coleoptile | 3dA | 53.56 | HC |
| SRR7265408 | coleoptile | 3dA | 41.82 | HC |
| SRR7265409 | coleoptile | 3dN | 28.86 | HC |
| SRR7265410 | coleoptile | 3dN | 23.45 | HC |
| SRR7265411 | coleoptile | 3dN | 3.82 | HC |
| SRR7265415 | coleoptile | 4dN | 30.65 | HC |
| SRR7265416 | coleoptile | 4dN | 4.50 | HC |
| SRR7265417 | coleoptile | 4dN | 4.74 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 10.13 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 7.48 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 41.35 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.52 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 4.40 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 6.66 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.08 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.50 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 6.03 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.66 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 44.66 | HC |
| SRR7265373 | embryo | dry seed 0 h | 15.67 | HC |
| SRR7265374 | embryo | dry seed 0 h | 11.20 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.21 | HC |
| SRR7265376 | embryo | 1hA | 21.77 | HC |
| SRR7265377 | embryo | 1hA | 10.76 | HC |
| SRR7265378 | embryo | 1hA | 10.03 | HC |
| SRR7265379 | embryo | 1hN | 17.48 | HC |
| SRR7265380 | embryo | 1hN | 19.73 | HC |
| SRR7265381 | embryo | 1hN | 18.13 | HC |
| SRR7265382 | embryo | 3hA | 39.10 | HC |
| SRR7265383 | embryo | 3hA | 34.81 | HC |
| SRR7265384 | embryo | 3hA | 23.56 | HC |
| SRR7265385 | embryo | 3hN | 9.94 | HC |
| SRR7265386 | embryo | 3hN | 10.35 | HC |
| SRR7265387 | embryo | 3hN | 17.09 | HC |
| SRR7265388 | embryo | 12hA | 21.58 | HC |
| SRR7265389 | embryo | 12hA | 21.34 | HC |
| SRR7265390 | embryo | 12hA | 22.15 | HC |
| SRR7265391 | embryo | 12hN | 14.93 | HC |
| SRR7265393 | embryo | 12hN | 13.89 | HC |
| SRR7265394 | embryo | 24hA | 22.29 | HC |
| SRR7265395 | embryo | 24hA | 26.07 | HC |
| SRR7265396 | embryo | 24hA | 6.11 | HC |
| SRR7265399 | embryo | 24hN | 15.20 | HC |
| SRR2338868 | endosprem | high_temperature | 4.92 | HC |
| SRR976168 | flag_leaf | wild_type | 3.61 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.54 | HC |
| SRR1213691 | flower | wt | 8.28 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.66 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.93 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 13.56 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.61 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 13.47 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 12.24 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 20.49 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 13.66 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 17.20 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 25.50 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 27.65 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 25.50 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 27.65 | HC |
| SRR1761529 | leaf | drought | 25.50 | HC |
| SRR1761531 | leaf | control | 27.65 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.33 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.39 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.40 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 7.47 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.71 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 7.45 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.74 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.61 | HC |
| SRR6502089 | leaf | control | 38.54 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 4.86 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 15.58 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 12.19 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 11.25 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 12.91 | HC |
| SRR6168973 | leaf | none (control) | 5.11 | HC |
| SRR6168974 | leaf | none (control) | 6.78 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 11.03 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.93 | HC |
| SRR8582888 | panicle | AM | 4.39 | HC |
| SRR8582889 | panicle | AM | 11.35 | HC |
| SRR5110429 | panicle | Dawn | 15.61 | HC |
| SRR5110430 | panicle | Dawn | 49.62 | HC |
| SRR5110431 | panicle | Dawn | 30.57 | HC |
| SRR5110432 | panicle | Dawn | 38.70 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 38.23 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 31.87 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 8.92 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 23.86 | HC |
| SRR5110437 | panicle | Dawn + 7h | 68.21 | HC |
| SRR5110438 | panicle | Dawn + 7h | 17.68 | HC |
| SRR5110439 | panicle | Dawn + 7h | 40.75 | HC |
| SRR5110440 | panicle | Dawn + 7h | 34.70 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 50.49 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 11.04 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 16.46 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 36.39 | HC |
| SRR5110445 | panicle | Dusk | 15.50 | HC |
| SRR5110446 | panicle | Dusk | 12.07 | HC |
| SRR5110447 | panicle | Dusk | 23.10 | HC |
| SRR5110448 | panicle | Dusk | 14.00 | HC |
| SRR5110449 | panicle | Dawn + 14h | 50.26 | HC |
| SRR5110450 | panicle | Dawn + 14h | 21.43 | HC |
| SRR5110451 | panicle | Dawn + 14h | 26.02 | HC |
| SRR5110452 | panicle | Dawn + 14h | 31.64 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 20.56 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 6.92 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 17.14 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 53.16 | HC |
| SRR5110457 | panicle | Dawn + 21h | 22.51 | HC |
| SRR5110458 | panicle | Dawn + 21h | 8.11 | HC |
| SRR5110459 | panicle | Dawn + 21h | 9.88 | HC |
| SRR5110460 | panicle | Dawn + 21h | 7.33 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.30 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.21 | HC |
| SRR1633182 | panicle | WT | 9.01 | HC |
| SRR1633185 | panicle | WT | 15.85 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.16 | HC |
| SRR4947479 | root | control | 13.07 | HC |
| SRR4947490 | root | Al | 12.65 | HC |
| SRR4947491 | root | Al | 8.24 | HC |
| SRR4947497 | root | control | 9.57 | HC |
| SRR4947498 | root | Al | 8.69 | HC |
| SRR4947499 | root | Al | 5.37 | HC |
| SRR4947501 | root | Al | 7.09 | HC |
| SRR4947502 | root | control | 9.73 | HC |
| SRR4947507 | root | Al | 10.75 | HC |
| SRR6502091 | root | 100 mM NaCl | 29.70 | HC |
| SRR6502092 | root | 100 mM NaCl | 19.58 | HC |
| SRR6502093 | root | 100 mM NaCl | 26.35 | HC |
| SRR6502094 | root | control | 22.77 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.34 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.29 | HC |
| SRR1740436 | root_differentiation_zone | wt | 9.75 | HC |
| SRR1740431 | root_elongation_zone | wt | 16.88 | HC |
| SRR1740433 | root_elongation_zone | wt | 18.54 | HC |
| SRR1740428 | root_meristematic_zone | wt | 7.11 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.41 | HC |
| SRR358791 | seedling | wt | 23.92 | HC |
| SRR358792 | seedling | wt | 33.28 | HC |
| SRR358793 | seedling | wt | 47.94 | HC |
| SRR358794 | seedling | wt | 41.62 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 12.88 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 14.02 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 9.84 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 10.20 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 17.22 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 11.02 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 11.77 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.35 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.41 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 25.17 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 24.67 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 24.88 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 34.82 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 19.68 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 20.55 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 58.85 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 57.97 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 43.69 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 48.24 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 45.38 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 54.66 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.10 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.90 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.97 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.43 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.73 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.02 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 4.80 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 6.69 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.49 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 8.45 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.73 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.40 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.24 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 10.38 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 12.08 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 17.70 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 23.32 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 23.46 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 33.90 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 11.86 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 17.78 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 54.44 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 27.07 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 20.42 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 11.98 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 114.65 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 12.32 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 20.69 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 28.86 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 24.72 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 25.86 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 14.30 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 21.59 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 16.15 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.36 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 8.17 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 11.29 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.94 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 4.48 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 6.84 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.70 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 7.68 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.90 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 6.26 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.47 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 42.24 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 5.34 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 74.54 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 14.04 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 14.79 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 14.15 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 8.92 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 10.33 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 44.34 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 13.80 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 14.06 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 11.08 | HC |