| SRR3745125 | anther | wt | 6.17 | HC |
| SRR3745126 | anther | wt | 7.31 | HC |
| SRR3745127 | anther | wt | 8.86 | HC |
| SRR5560727 | caryopsis | wild_type | 8.42 | HC |
| SRR5560728 | caryopsis | wild_type | 5.79 | HC |
| SRR5560729 | caryopsis | wild_type | 5.90 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.92 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.65 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.02 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.44 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.81 | HC |
| SRR1213691 | flower | wt | 5.02 | HC |
| SRR8060835 | leaf | wild_type | 3.14 | HC |
| SRR8611900 | leaf | Non-inoculated | 8.83 | HC |
| SRR8611901 | leaf | Non-inoculated | 9.06 | HC |
| SRR8611902 | leaf | Non-inoculated | 9.60 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 6.64 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 6.28 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.44 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.45 | HC |
| SRR1213693 | leaf | wt | 4.99 | HC |
| SRR5856929 | leaf | control | 2.31 | HC |
| SRR5856930 | leaf | salt | 4.19 | HC |
| SRR5856931 | leaf | salt | 4.32 | HC |
| SRR5856932 | leaf | salt | 3.48 | HC |
| SRR5856934 | leaf | control | 3.44 | HC |
| SRR5856935 | leaf | control | 4.69 | HC |
| SRR5856936 | leaf | salt | 7.51 | HC |
| SRR5856937 | leaf | salt | 7.11 | HC |
| SRR5856938 | leaf | salt | 7.92 | HC |
| SRR6168973 | leaf | none (control) | 7.57 | HC |
| SRR6168974 | leaf | none (control) | 6.77 | HC |
| SRR6168975 | leaf | none (control) | 8.51 | HC |
| SRR6168981 | leaf | none (control) | 3.62 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 4.74 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 5.41 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.75 | HC |
| SRR5110438 | panicle | Dawn + 7h | 4.80 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 6.60 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.74 | HC |
| SRR5110445 | panicle | Dusk | 7.82 | HC |
| SRR5110449 | panicle | Dawn + 14h | 9.20 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.04 | HC |
| SRR5110451 | panicle | Dawn + 14h | 7.65 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.74 | HC |
| SRR1633182 | panicle | WT | 6.35 | HC |
| SRR1633185 | panicle | WT | 9.04 | HC |
| SRR5126147 | root | "mock,1_day" | 5.04 | HC |
| SRR5126148 | root | "mock,1_day" | 4.01 | HC |
| SRR5126149 | root | "mock,1_day" | 7.87 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.77 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.29 | HC |
| SRR5126153 | root | "mock,7_days" | 6.17 | HC |
| SRR5126155 | root | "mock,7_days" | 7.09 | HC |
| SRR5126157 | root | "mock,7_days" | 8.92 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 9.38 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 8.10 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.30 | HC |
| SRR5126165 | root | "mock,14_days" | 7.66 | HC |
| SRR5126167 | root | "mock,14_days" | 5.61 | HC |
| SRR5126169 | root | "mock,14_days" | 9.53 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.19 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.96 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.36 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 4.04 | HC |
| SRR1213694 | root | wt | 3.76 | HC |
| SRR1213695 | root | wt | 3.92 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.73 | HC |
| SRR6502094 | root | control | 8.60 | HC |
| SRR6502095 | root | control | 5.95 | HC |
| SRR6502096 | root | control | 7.18 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.18 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.47 | HC |
| SRR6502106 | root | control | 7.45 | HC |
| SRR6502107 | root | control | 6.12 | HC |
| SRR6441554 | seedling | wild_type | 3.47 | HC |
| SRR6441555 | seedling | wild_type | 3.45 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.95 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.35 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 7.68 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 10.62 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.89 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.22 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 6.16 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 7.22 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 7.41 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.82 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.91 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.66 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.83 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.98 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 10.49 | HC |