| SRR7265400 | coleoptile | 2dA | 9.58 | HC |
| SRR7265401 | coleoptile | 2dA | 6.52 | HC |
| SRR7265402 | coleoptile | 2dA | 10.70 | HC |
| SRR7265406 | coleoptile | 3dA | 13.94 | HC |
| SRR7265407 | coleoptile | 3dA | 11.64 | HC |
| SRR7265408 | coleoptile | 3dA | 9.08 | HC |
| SRR7265409 | coleoptile | 3dN | 5.35 | HC |
| SRR7265411 | coleoptile | 3dN | 4.11 | HC |
| SRR7265413 | coleoptile | 4dA | 5.43 | HC |
| SRR7265414 | coleoptile | 4dA | 9.37 | HC |
| SRR7265416 | coleoptile | 4dN | 7.79 | HC |
| SRR7265417 | coleoptile | 4dN | 6.38 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 9.35 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 8.68 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 6.51 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.81 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.19 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 7.03 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 8.71 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 11.23 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 7.56 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 7.49 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 7.20 | HC |
| SRR8240820 | leaf | wild_type | 2.65 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 9.11 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 8.91 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.43 | HC |
| SRR5856927 | leaf | control | 13.14 | HC |
| SRR5856928 | leaf | control | 18.09 | HC |
| SRR5856929 | leaf | control | 17.21 | HC |
| SRR5856930 | leaf | salt | 3.17 | HC |
| SRR5856931 | leaf | salt | 5.98 | HC |
| SRR5856932 | leaf | salt | 9.24 | HC |
| SRR5856933 | leaf | control | 14.14 | HC |
| SRR5856934 | leaf | control | 18.50 | HC |
| SRR5856935 | leaf | control | 18.34 | HC |
| SRR5856936 | leaf | salt | 4.86 | HC |
| SRR5856937 | leaf | salt | 4.88 | HC |
| SRR5856938 | leaf | salt | 4.10 | HC |
| SRR6168979 | leaf | none (control) | 2.53 | HC |
| SRR6168981 | leaf | none (control) | 3.17 | HC |
| SRR4947496 | root | control | 15.96 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.06 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.66 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 4.45 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 5.18 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 8.70 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.52 | HC |
| SRR5126147 | root | "mock,1_day" | 9.97 | HC |
| SRR5126148 | root | "mock,1_day" | 17.27 | HC |
| SRR5126149 | root | "mock,1_day" | 9.42 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 14.11 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 11.77 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.88 | HC |
| SRR5126153 | root | "mock,7_days" | 10.49 | HC |
| SRR5126155 | root | "mock,7_days" | 5.93 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.52 | HC |
| SRR5126167 | root | "mock,14_days" | 6.78 | HC |
| SRR5126169 | root | "mock,14_days" | 10.19 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.27 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 11.37 | HC |
| SRR1213694 | root | wt | 14.82 | HC |
| SRR4947483 | root | Al | 9.09 | HC |
| SRR4947485 | root | Al | 5.73 | HC |
| SRR4947487 | root | control | 5.82 | HC |
| SRR4947489 | root | control | 8.76 | HC |
| SRR4947490 | root | Al | 4.51 | HC |
| SRR4947491 | root | Al | 6.07 | HC |
| SRR4947492 | root | Al | 16.30 | HC |
| SRR4947493 | root | Al | 4.95 | HC |
| SRR4947494 | root | control | 5.92 | HC |
| SRR4947503 | root | control | 7.30 | HC |
| SRR4947505 | root | control | 9.01 | HC |
| SRR4947506 | root | Al | 4.53 | HC |
| SRR4947508 | root | Al | 11.99 | HC |
| SRR6502093 | root | 100 mM NaCl | 11.08 | HC |
| SRR6502094 | root | control | 25.97 | HC |
| SRR6502095 | root | control | 6.54 | HC |
| SRR6502096 | root | control | 10.05 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.86 | HC |
| SRR6502104 | root | 100 mM NaCl | 9.77 | HC |
| SRR6502105 | root | 100 mM NaCl | 8.12 | HC |
| SRR6502106 | root | control | 15.47 | HC |
| SRR6502107 | root | control | 10.60 | HC |
| SRR6502108 | root | control | 6.86 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.44 | HC |
| SRR1740435 | root_differentiation_zone | wt | 21.44 | HC |
| SRR1740436 | root_differentiation_zone | wt | 6.64 | HC |
| SRR1740431 | root_elongation_zone | wt | 8.69 | HC |
| SRR1740432 | root_elongation_zone | wt | 7.85 | HC |
| SRR1740433 | root_elongation_zone | wt | 8.10 | HC |
| SRR1740428 | root_meristematic_zone | wt | 8.80 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.39 | HC |
| SRR1740430 | root_meristematic_zone | wt | 3.92 | HC |
| SRR6441555 | seedling | wild_type | 4.85 | HC |
| SRR2154082 | seedling | wt | 7.12 | HC |
| SRR2154084 | seedling | wt | 5.20 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.42 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 9.98 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.82 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 12.92 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.74 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.97 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 12.18 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.62 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.88 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 10.54 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.03 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.72 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.58 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.98 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 4.87 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.35 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.84 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.60 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.14 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.77 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.66 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 10.86 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 8.60 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 8.90 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 9.99 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 8.61 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 7.70 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.54 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.68 | HC |