| SRR4457251 | 2nd_leaf | DAH4 | 3.77 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 6.61 | HC |
| SRR5560727 | caryopsis | wild_type | 17.05 | HC |
| SRR5560728 | caryopsis | wild_type | 15.95 | HC |
| SRR5560729 | caryopsis | wild_type | 12.37 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 9.04 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.26 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.69 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.97 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 9.48 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 6.23 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.66 | HC |
| SRR1213691 | flower | wt | 5.92 | HC |
| SRR8060835 | leaf | wild_type | 5.72 | HC |
| SRR8060836 | leaf | wild_type | 4.85 | HC |
| SRR8060837 | leaf | wild_type | 6.62 | HC |
| SRR8240824 | leaf | wild_type | 4.11 | HC |
| SRR8240825 | leaf | wild_type | 5.51 | HC |
| SRR8240826 | leaf | wild_type | 2.70 | HC |
| SRR8240818 | leaf | wild_type | 4.00 | HC |
| SRR8240819 | leaf | wild_type | 6.53 | HC |
| SRR8240820 | leaf | wild_type | 5.53 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.51 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.99 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.21 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.73 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.28 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.30 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.92 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.24 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.53 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.85 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.29 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.74 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.90 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.65 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.85 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.21 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.16 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.81 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.29 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.44 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 8.71 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 9.73 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.00 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.90 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 10.75 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.27 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.45 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.82 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.22 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.14 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.77 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.62 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.69 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.29 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.78 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.78 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 7.58 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 7.04 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.32 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 7.04 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.32 | HC |
| SRR1761528 | leaf | drought | 7.04 | HC |
| SRR1761529 | leaf | drought | 7.32 | HC |
| SRR504365 | leaf | wt | 11.80 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.39 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 8.56 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 4.11 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 6.31 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.21 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.19 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 9.09 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 8.11 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.67 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 9.40 | HC |
| SRR8611900 | leaf | Non-inoculated | 15.82 | HC |
| SRR8611901 | leaf | Non-inoculated | 15.49 | HC |
| SRR8611902 | leaf | Non-inoculated | 15.25 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 52.68 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 57.29 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 57.97 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.50 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 9.25 | HC |
| SRR1213692 | leaf | wt | 5.68 | HC |
| SRR1213693 | leaf | wt | 9.35 | HC |
| SRR6168973 | leaf | none (control) | 20.87 | HC |
| SRR6168974 | leaf | none (control) | 23.54 | HC |
| SRR6168975 | leaf | none (control) | 29.14 | HC |
| SRR6168979 | leaf | none (control) | 5.80 | HC |
| SRR6168980 | leaf | none (control) | 9.63 | HC |
| SRR6168981 | leaf | none (control) | 17.26 | HC |
| SRR8582888 | panicle | AM | 16.55 | HC |
| SRR8582889 | panicle | AM | 13.69 | HC |
| SRR8582890 | panicle | AM | 11.70 | HC |
| SRR8582891 | panicle | PM | 68.83 | HC |
| SRR8582892 | panicle | PM | 35.08 | HC |
| SRR8582893 | panicle | PM | 63.15 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.41 | HC |
| SRR1633182 | panicle | WT | 22.15 | HC |
| SRR1633185 | panicle | WT | 18.71 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.36 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.37 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 10.47 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 9.97 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.82 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 19.60 | HC |
| SRR5126147 | root | "mock,1_day" | 6.38 | HC |
| SRR5126148 | root | "mock,1_day" | 6.73 | HC |
| SRR5126149 | root | "mock,1_day" | 9.55 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.03 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.89 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.49 | HC |
| SRR5126153 | root | "mock,7_days" | 6.86 | HC |
| SRR5126155 | root | "mock,7_days" | 16.63 | HC |
| SRR5126157 | root | "mock,7_days" | 15.68 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 15.25 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 15.21 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 11.75 | HC |
| SRR5126165 | root | "mock,14_days" | 7.54 | HC |
| SRR5126167 | root | "mock,14_days" | 8.16 | HC |
| SRR5126169 | root | "mock,14_days" | 17.54 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 13.74 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 14.55 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 24.33 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 5.47 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 7.94 | HC |
| SRR1213694 | root | wt | 3.78 | HC |
| SRR1213695 | root | wt | 8.68 | HC |
| SRR1740434 | root_differentiation_zone | wt | 5.77 | HC |
| SRR1740431 | root_elongation_zone | wt | 4.77 | HC |
| SRR1740432 | root_elongation_zone | wt | 8.40 | HC |
| SRR1740433 | root_elongation_zone | wt | 6.62 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.32 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.75 | HC |
| SRR6441554 | seedling | wild_type | 22.16 | HC |
| SRR6441555 | seedling | wild_type | 24.04 | HC |
| SRR2154086 | seedling | wt | 21.26 | HC |
| SRR2154085 | seedling | wt | 14.42 | HC |
| SRR2154087 | seedling | wt | 14.86 | HC |
| SRR3098741 | seedling | wt | 8.04 | HC |
| SRR3098742 | seedling | wt | 7.74 | HC |
| SRR3098743 | seedling | wt | 8.45 | HC |
| SRR2857719 | seedling | drought_stress_0h | 11.49 | HC |
| SRR2857720 | seedling | drought_stress_1h | 7.85 | HC |
| SRR2857721 | seedling | drought_stress_6h | 11.10 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 38.28 | HC |
| SRR1944583 | seedling | no_treatment | 9.91 | HC |
| SRR358791 | seedling | wt | 13.89 | HC |
| SRR358792 | seedling | wt | 14.88 | HC |
| SRR358793 | seedling | wt | 23.09 | HC |
| SRR358794 | seedling | wt | 23.76 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 20.96 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 21.77 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 14.66 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 14.86 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 19.64 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.00 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.09 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 28.21 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 15.06 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 6.14 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 6.04 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.63 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.25 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 12.19 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 15.72 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 24.20 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 21.71 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 16.27 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 22.83 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 21.97 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 16.78 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.83 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.94 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.84 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 7.40 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.39 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.65 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.53 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.59 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.54 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.94 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 4.50 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.17 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.22 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.03 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.20 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 7.22 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.77 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.00 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 16.04 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 10.69 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 11.80 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.59 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 8.01 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 12.58 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 13.62 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 9.56 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 23.82 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 20.02 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 26.39 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 10.55 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 12.40 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 10.42 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.21 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.61 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 9.99 | HC |