| SRR4457249 | 2nd_leaf | DAH4 | 16.56 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 10.57 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 12.28 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 4.22 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 4.69 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.80 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.94 | HC |
| SRR5560727 | caryopsis | wild_type | 81.44 | HC |
| SRR5560728 | caryopsis | wild_type | 51.88 | HC |
| SRR5560729 | caryopsis | wild_type | 34.51 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.10 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.25 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 6.99 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.60 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.15 | HC |
| SRR2338868 | endosprem | high_temperature | 3.68 | HC |
| SRR976168 | flag_leaf | wild_type | 6.53 | HC |
| SRR4457231 | flag_leaf | DAH4 | 14.89 | HC |
| SRR4457232 | flag_leaf | DAH4 | 11.27 | HC |
| SRR4457233 | flag_leaf | DAH4 | 9.39 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.88 | HC |
| SRR1213691 | flower | wt | 7.74 | HC |
| SRR8060835 | leaf | wild_type | 16.43 | HC |
| SRR8060836 | leaf | wild_type | 35.88 | HC |
| SRR8060837 | leaf | wild_type | 11.44 | HC |
| SRR8240824 | leaf | wild_type | 14.14 | HC |
| SRR8240825 | leaf | wild_type | 15.69 | HC |
| SRR8240826 | leaf | wild_type | 10.13 | HC |
| SRR8240818 | leaf | wild_type | 6.75 | HC |
| SRR8240819 | leaf | wild_type | 9.28 | HC |
| SRR8240820 | leaf | wild_type | 9.56 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 11.48 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 11.97 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 8.62 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 8.33 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.10 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.77 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.30 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.37 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.46 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.54 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.42 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.09 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.05 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.19 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.13 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.73 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.02 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.19 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.49 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.85 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.59 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.31 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.19 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.48 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 6.54 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 10.09 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 6.66 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 6.66 | HC |
| SRR1761529 | leaf | drought | 6.66 | HC |
| SRR504365 | leaf | wt | 6.87 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.39 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.85 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.62 | HC |
| SRR6417967 | leaf | H2O_control | 8.16 | HC |
| SRR6417968 | leaf | H2O_control | 6.52 | HC |
| SRR6417969 | leaf | H2O_control | 8.15 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 21.14 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 32.38 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 10.29 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 9.77 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 15.30 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 14.58 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 8.50 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 21.13 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.52 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 31.35 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.69 | HC |
| SRR8611901 | leaf | Non-inoculated | 10.49 | HC |
| SRR8611902 | leaf | Non-inoculated | 10.85 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 30.69 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 29.57 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 31.87 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.16 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.67 | HC |
| SRR1213693 | leaf | wt | 7.16 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 8.84 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 12.51 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 11.63 | HC |
| SRR6502088 | leaf | control | 8.03 | HC |
| SRR6502089 | leaf | control | 7.18 | HC |
| SRR6502090 | leaf | control | 8.48 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 11.41 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 9.92 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 17.91 | HC |
| SRR6502100 | leaf | control | 10.36 | HC |
| SRR6502101 | leaf | control | 6.49 | HC |
| SRR6502102 | leaf | control | 8.79 | HC |
| SRR5856933 | leaf | control | 6.22 | HC |
| SRR5856934 | leaf | control | 5.69 | HC |
| SRR5856935 | leaf | control | 9.10 | HC |
| SRR5856936 | leaf | salt | 10.09 | HC |
| SRR5856937 | leaf | salt | 10.87 | HC |
| SRR5856938 | leaf | salt | 5.46 | HC |
| SRR6168973 | leaf | none (control) | 34.84 | HC |
| SRR6168974 | leaf | none (control) | 35.73 | HC |
| SRR6168975 | leaf | none (control) | 33.48 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 20.35 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 18.76 | HC |
| SRR6168979 | leaf | none (control) | 5.26 | HC |
| SRR6168980 | leaf | none (control) | 5.91 | HC |
| SRR6168981 | leaf | none (control) | 17.97 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 8.77 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 12.90 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 51.53 | HC |
| SRR8582888 | panicle | AM | 12.52 | HC |
| SRR8582889 | panicle | AM | 13.73 | HC |
| SRR8582890 | panicle | AM | 8.56 | HC |
| SRR8582891 | panicle | PM | 43.40 | HC |
| SRR8582892 | panicle | PM | 38.99 | HC |
| SRR8582893 | panicle | PM | 55.53 | HC |
| SRR4947496 | root | control | 5.10 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.17 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.42 | HC |
| SRR1633182 | panicle | WT | 28.44 | HC |
| SRR1633185 | panicle | WT | 30.71 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 21.54 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 18.93 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 25.48 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 22.42 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 24.75 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 33.52 | HC |
| SRR5126157 | root | "mock,7_days" | 6.50 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.36 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.73 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.30 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.75 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 13.61 | HC |
| SRR1213695 | root | wt | 4.65 | HC |
| SRR4947480 | root | control | 5.91 | HC |
| SRR4947481 | root | control | 7.85 | HC |
| SRR4947485 | root | Al | 5.12 | HC |
| SRR4947488 | root | control | 7.33 | HC |
| SRR4947489 | root | control | 7.03 | HC |
| SRR4947497 | root | control | 6.17 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.19 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.41 | HC |
| SRR6502093 | root | 100 mM NaCl | 8.06 | HC |
| SRR6502094 | root | control | 6.17 | HC |
| SRR6502095 | root | control | 5.11 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.17 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.47 | HC |
| SRR6502107 | root | control | 4.39 | HC |
| SRR6441554 | seedling | wild_type | 10.57 | HC |
| SRR6441555 | seedling | wild_type | 8.01 | HC |
| SRR2154086 | seedling | wt | 7.47 | HC |
| SRR2154085 | seedling | wt | 5.84 | HC |
| SRR2154087 | seedling | wt | 7.37 | HC |
| SRR3098741 | seedling | wt | 13.41 | HC |
| SRR3098742 | seedling | wt | 14.79 | HC |
| SRR3098743 | seedling | wt | 18.72 | HC |
| SRR2857719 | seedling | drought_stress_0h | 7.59 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.63 | HC |
| SRR2857721 | seedling | drought_stress_6h | 5.45 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 8.67 | HC |
| SRR1944583 | seedling | no_treatment | 5.08 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 6.15 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.45 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.57 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.88 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.12 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.36 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.08 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.08 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.14 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 7.00 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 8.98 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 6.79 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 24.34 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 32.56 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 30.53 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 36.73 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 49.66 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 31.25 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 31.94 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 27.76 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.57 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.88 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.10 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.75 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 18.29 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 21.38 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.85 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.28 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 37.57 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 29.64 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.38 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 28.86 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 25.41 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 28.89 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.74 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 11.01 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.09 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.62 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.90 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 8.56 | HC |