| SRR4457249 | 2nd_leaf | DAH4 | 7.86 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 7.74 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 7.80 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 11.91 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 11.33 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 21.51 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 12.52 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 11.02 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 26.70 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 12.29 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 9.36 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 20.66 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 26.24 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 34.46 | HC |
| SRR3745125 | anther | wt | 15.73 | HC |
| SRR3745126 | anther | wt | 16.30 | HC |
| SRR3745127 | anther | wt | 15.67 | HC |
| SRR358795 | callus | wt | 74.12 | HC |
| SRR358796 | callus | wt | 74.36 | HC |
| SRR358797 | callus | wt | 85.78 | HC |
| SRR358798 | callus | wt | 84.52 | HC |
| SRR5560728 | caryopsis | wild_type | 9.87 | HC |
| SRR5560729 | caryopsis | wild_type | 7.57 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 7.88 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 7.07 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 11.78 | HC |
| SRR7265401 | coleoptile | 2dA | 3.68 | HC |
| SRR7265405 | coleoptile | 2dN | 30.47 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.62 | HC |
| SRR7265396 | embryo | 24hA | 34.57 | HC |
| SRR2338866 | endosprem | control | 4.97 | HC |
| SRR2338869 | endosprem | high_temperature | 4.37 | HC |
| SRR976168 | flag_leaf | wild_type | 12.08 | HC |
| SRR4457232 | flag_leaf | DAH4 | 5.64 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.64 | HC |
| SRR4457234 | flag_leaf | DAH12 | 10.46 | HC |
| SRR4457235 | flag_leaf | DAH12 | 10.28 | HC |
| SRR4457236 | flag_leaf | DAH12 | 10.17 | HC |
| SRR4457237 | flag_leaf | DAH20 | 14.95 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.32 | HC |
| SRR4457243 | flag_leaf | DAH36 | 7.69 | HC |
| SRR4457244 | flag_leaf | DAH36 | 18.77 | HC |
| SRR4457245 | flag_leaf | DAH36 | 26.84 | HC |
| SRR4457246 | flag_leaf | DAH44 | 29.68 | HC |
| SRR4457247 | flag_leaf | DAH44 | 6.92 | HC |
| SRR4457248 | flag_leaf | DAH44 | 10.83 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.95 | HC |
| SRR1213691 | flower | wt | 4.95 | HC |
| SRR8060837 | leaf | wild_type | 2.99 | HC |
| SRR8240824 | leaf | wild_type | 5.46 | HC |
| SRR8240825 | leaf | wild_type | 8.96 | HC |
| SRR8240818 | leaf | wild_type | 6.90 | HC |
| SRR8240819 | leaf | wild_type | 5.19 | HC |
| SRR8240820 | leaf | wild_type | 5.87 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 7.37 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 5.40 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.03 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.62 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.39 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.99 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.00 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.88 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.46 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.91 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.04 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.87 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.54 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 5.20 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 7.13 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 48.47 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 40.36 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 44.07 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 48.47 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 40.36 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 44.07 | HC |
| SRR1761528 | leaf | drought | 48.47 | HC |
| SRR1761529 | leaf | drought | 40.37 | HC |
| SRR1761530 | leaf | control | 44.07 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 12.09 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.09 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.57 | HC |
| SRR6417967 | leaf | H2O_control | 7.62 | HC |
| SRR6417968 | leaf | H2O_control | 4.32 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 20.41 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 20.01 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 18.61 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 23.09 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 34.17 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 21.34 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 4.81 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 17.84 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 30.38 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.59 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.11 | HC |
| SRR1213693 | leaf | wt | 5.64 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 33.63 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 44.70 | HC |
| SRR6502089 | leaf | control | 41.52 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 6.80 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.25 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 17.49 | HC |
| SRR6502100 | leaf | control | 41.40 | HC |
| SRR6502101 | leaf | control | 44.53 | HC |
| SRR6502102 | leaf | control | 41.53 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 20.21 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 21.41 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 19.39 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 17.86 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 18.77 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 20.80 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 12.15 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 12.19 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 11.56 | HC |
| SRR6168974 | leaf | none (control) | 32.22 | HC |
| SRR6168975 | leaf | none (control) | 17.65 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 7.15 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 20.12 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 6.09 | HC |
| SRR5110429 | panicle | Dawn | 7.49 | HC |
| SRR5110430 | panicle | Dawn | 32.45 | HC |
| SRR5110431 | panicle | Dawn | 43.13 | HC |
| SRR5110432 | panicle | Dawn | 6.72 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 36.69 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 40.13 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 46.56 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.70 | HC |
| SRR5110438 | panicle | Dawn + 7h | 43.57 | HC |
| SRR5110439 | panicle | Dawn + 7h | 37.09 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.46 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 51.99 | HC |
| SRR5110449 | panicle | Dawn + 14h | 30.08 | HC |
| SRR5110460 | panicle | Dawn + 21h | 30.20 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.41 | HC |
| SRR1633182 | panicle | WT | 33.68 | HC |
| SRR1633185 | panicle | WT | 50.89 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 9.41 | HC |
| SRR5126147 | root | "mock,1_day" | 4.37 | HC |
| SRR5126148 | root | "mock,1_day" | 3.85 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 8.06 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.31 | HC |
| SRR5126153 | root | "mock,7_days" | 4.63 | HC |
| SRR5126155 | root | "mock,7_days" | 8.85 | HC |
| SRR5126157 | root | "mock,7_days" | 9.16 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 11.66 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 13.41 | HC |
| SRR5126165 | root | "mock,14_days" | 5.45 | HC |
| SRR5126167 | root | "mock,14_days" | 7.57 | HC |
| SRR5126169 | root | "mock,14_days" | 12.39 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.14 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 8.45 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.97 | HC |
| SRR1213694 | root | wt | 10.87 | HC |
| SRR1213695 | root | wt | 6.61 | HC |
| SRR4947480 | root | control | 33.30 | HC |
| SRR4947489 | root | control | 31.36 | HC |
| SRR4947491 | root | Al | 39.15 | HC |
| SRR4947492 | root | Al | 36.73 | HC |
| SRR4947497 | root | control | 37.82 | HC |
| SRR4947498 | root | Al | 40.83 | HC |
| SRR4947500 | root | Al | 50.74 | HC |
| SRR4947502 | root | control | 6.54 | HC |
| SRR4947503 | root | control | 43.53 | HC |
| SRR4947507 | root | Al | 48.22 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.25 | HC |
| SRR6502092 | root | 100 mM NaCl | 14.49 | HC |
| SRR6502095 | root | control | 15.42 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.08 | HC |
| SRR6502107 | root | control | 9.12 | HC |
| SRR6502108 | root | control | 8.73 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.33 | HC |
| SRR1740431 | root_elongation_zone | wt | 7.74 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.35 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.15 | HC |
| SRR1740428 | root_meristematic_zone | wt | 7.16 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.83 | HC |
| SRR2154082 | seedling | wt | 4.29 | HC |
| SRR2154083 | seedling | wt | 4.14 | HC |
| SRR2154085 | seedling | wt | 4.97 | HC |
| SRR3098742 | seedling | wt | 8.01 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.29 | HC |
| SRR2857720 | seedling | drought_stress_1h | 11.33 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 28.04 | HC |
| SRR358791 | seedling | wt | 66.20 | HC |
| SRR358792 | seedling | wt | 65.07 | HC |
| SRR358793 | seedling | wt | 15.33 | HC |
| SRR358794 | seedling | wt | 14.09 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 13.76 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 13.18 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 12.38 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.54 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.21 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.74 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 18.71 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 9.72 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 6.87 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 6.91 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.48 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.36 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.64 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.07 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.84 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 5.73 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 6.40 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.85 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.70 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 6.60 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 10.27 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.81 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 28.73 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.39 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 8.23 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.61 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 7.06 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 10.96 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 16.15 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.20 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.22 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 17.79 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.52 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 64.46 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 59.61 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 60.82 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 41.55 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 60.98 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 45.20 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 53.38 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 58.88 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 55.18 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 48.01 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 50.98 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 50.47 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 58.09 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 52.33 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 54.86 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 53.94 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 49.48 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 53.71 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 58.11 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 50.78 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 53.61 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 53.81 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 63.48 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 94.20 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 69.37 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 94.92 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 95.92 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 102.27 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.98 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.10 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 33.51 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.18 | HC |