| SRR4457253 | 2nd_leaf | DAH12 | 4.30 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.86 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.58 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 10.54 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 11.29 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 10.44 | HC |
| SRR5560727 | caryopsis | wild_type | 7.22 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 32.97 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 32.35 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 27.61 | HC |
| SRR4947495 | root | control | 83.02 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 28.84 | HC |
| SRR7265406 | coleoptile | 3dA | 17.04 | HC |
| SRR7265407 | coleoptile | 3dA | 16.18 | HC |
| SRR7265408 | coleoptile | 3dA | 12.95 | HC |
| SRR7265410 | coleoptile | 3dN | 4.78 | HC |
| SRR7265411 | coleoptile | 3dN | 4.11 | HC |
| SRR7265412 | coleoptile | 4dA | 3.76 | HC |
| SRR7265415 | coleoptile | 4dN | 23.23 | HC |
| SRR7265416 | coleoptile | 4dN | 25.85 | HC |
| SRR7265417 | coleoptile | 4dN | 28.52 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 32.71 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 34.00 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 31.93 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 14.84 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 7.69 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 12.53 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 26.17 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 9.09 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 7.72 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 11.22 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 23.62 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.24 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.66 | HC |
| SRR976168 | flag_leaf | wild_type | 23.98 | HC |
| SRR4457240 | flag_leaf | DAH28 | 9.71 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.26 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.77 | HC |
| SRR4457246 | flag_leaf | DAH44 | 9.95 | HC |
| SRR4457247 | flag_leaf | DAH44 | 6.52 | HC |
| SRR4457248 | flag_leaf | DAH44 | 10.58 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.35 | HC |
| SRR8060835 | leaf | wild_type | 24.46 | HC |
| SRR8060836 | leaf | wild_type | 73.30 | HC |
| SRR8060837 | leaf | wild_type | 24.05 | HC |
| SRR8240824 | leaf | wild_type | 12.44 | HC |
| SRR8240825 | leaf | wild_type | 4.28 | HC |
| SRR8240826 | leaf | wild_type | 2.87 | HC |
| SRR8240818 | leaf | wild_type | 8.09 | HC |
| SRR8240819 | leaf | wild_type | 20.28 | HC |
| SRR8240820 | leaf | wild_type | 15.08 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 18.80 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 39.47 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 30.86 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 34.24 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.38 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 10.39 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 7.48 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 63.70 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 60.47 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 19.23 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 11.92 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 63.70 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 60.47 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 19.23 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 11.92 | HC |
| SRR1761528 | leaf | drought | 63.70 | HC |
| SRR1761529 | leaf | drought | 60.48 | HC |
| SRR1761530 | leaf | control | 19.23 | HC |
| SRR1761531 | leaf | control | 11.92 | HC |
| SRR504365 | leaf | wt | 9.52 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.31 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.69 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.86 | HC |
| SRR6417967 | leaf | H2O_control | 11.07 | HC |
| SRR6417968 | leaf | H2O_control | 7.02 | HC |
| SRR6417969 | leaf | H2O_control | 21.08 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 82.92 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 95.05 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 94.78 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 88.05 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 11.02 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 14.72 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 48.09 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 52.14 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 55.90 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 68.50 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 18.03 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 83.77 | HC |
| SRR8611900 | leaf | Non-inoculated | 69.71 | HC |
| SRR8611901 | leaf | Non-inoculated | 76.13 | HC |
| SRR8611902 | leaf | Non-inoculated | 77.68 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.88 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 6.09 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.82 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 35.65 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 41.66 | HC |
| SRR1213692 | leaf | wt | 47.71 | HC |
| SRR1213693 | leaf | wt | 43.98 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 7.46 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 11.91 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 20.01 | HC |
| SRR6502088 | leaf | control | 7.10 | HC |
| SRR6502089 | leaf | control | 8.37 | HC |
| SRR6502090 | leaf | control | 4.71 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 8.37 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 11.24 | HC |
| SRR6502100 | leaf | control | 6.96 | HC |
| SRR6502101 | leaf | control | 4.57 | HC |
| SRR6502102 | leaf | control | 4.78 | HC |
| SRR5856927 | leaf | control | 59.17 | HC |
| SRR5856928 | leaf | control | 63.95 | HC |
| SRR5856929 | leaf | control | 35.49 | HC |
| SRR5856930 | leaf | salt | 73.28 | HC |
| SRR5856931 | leaf | salt | 67.66 | HC |
| SRR5856932 | leaf | salt | 61.49 | HC |
| SRR5856933 | leaf | control | 85.70 | HC |
| SRR5856934 | leaf | control | 62.88 | HC |
| SRR5856935 | leaf | control | 85.84 | HC |
| SRR5856936 | leaf | salt | 90.28 | HC |
| SRR5856937 | leaf | salt | 69.35 | HC |
| SRR5856938 | leaf | salt | 62.30 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 9.47 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 8.22 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 14.70 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 14.35 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 32.33 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 10.66 | HC |
| SRR6168973 | leaf | none (control) | 4.52 | HC |
| SRR8582890 | panicle | AM | 5.07 | HC |
| SRR8582893 | panicle | PM | 6.63 | HC |
| SRR5110430 | panicle | Dawn | 12.65 | HC |
| SRR5110431 | panicle | Dawn | 8.81 | HC |
| SRR5110432 | panicle | Dawn | 4.32 | HC |
| SRR4947496 | root | control | 88.12 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 13.65 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 10.76 | HC |
| SRR5110437 | panicle | Dawn + 7h | 8.72 | HC |
| SRR5110438 | panicle | Dawn + 7h | 10.05 | HC |
| SRR5110439 | panicle | Dawn + 7h | 7.76 | HC |
| SRR5110440 | panicle | Dawn + 7h | 6.18 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 7.35 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 13.85 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 9.94 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 25.14 | HC |
| SRR5110445 | panicle | Dusk | 12.30 | HC |
| SRR5110446 | panicle | Dusk | 11.39 | HC |
| SRR5110447 | panicle | Dusk | 16.24 | HC |
| SRR5110448 | panicle | Dusk | 10.27 | HC |
| SRR5110449 | panicle | Dawn + 14h | 12.47 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.84 | HC |
| SRR5110451 | panicle | Dawn + 14h | 11.52 | HC |
| SRR5110452 | panicle | Dawn + 14h | 8.98 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.37 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.29 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 6.70 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.99 | HC |
| SRR5110457 | panicle | Dawn + 21h | 9.89 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.91 | HC |
| SRR5126147 | root | "mock,1_day" | 138.51 | HC |
| SRR5126148 | root | "mock,1_day" | 88.52 | HC |
| SRR5126149 | root | "mock,1_day" | 160.53 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 144.70 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 126.40 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 133.67 | HC |
| SRR5126153 | root | "mock,7_days" | 50.62 | HC |
| SRR5126155 | root | "mock,7_days" | 76.14 | HC |
| SRR5126157 | root | "mock,7_days" | 68.34 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 67.84 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 57.32 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 97.09 | HC |
| SRR5126165 | root | "mock,14_days" | 122.06 | HC |
| SRR5126167 | root | "mock,14_days" | 129.74 | HC |
| SRR5126169 | root | "mock,14_days" | 73.26 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 25.31 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 69.81 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 31.33 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 57.95 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 99.02 | HC |
| SRR1213694 | root | wt | 159.56 | HC |
| SRR1213695 | root | wt | 44.88 | HC |
| SRR4947478 | root | control | 77.01 | HC |
| SRR4947479 | root | control | 82.92 | HC |
| SRR4947480 | root | control | 96.24 | HC |
| SRR4947481 | root | control | 104.00 | HC |
| SRR4947482 | root | Al | 210.61 | HC |
| SRR4947483 | root | Al | 92.18 | HC |
| SRR4947484 | root | Al | 113.88 | HC |
| SRR4947485 | root | Al | 98.17 | HC |
| SRR4947487 | root | control | 51.45 | HC |
| SRR4947488 | root | control | 66.23 | HC |
| SRR4947489 | root | control | 73.10 | HC |
| SRR4947490 | root | Al | 70.49 | HC |
| SRR4947491 | root | Al | 95.78 | HC |
| SRR4947492 | root | Al | 63.92 | HC |
| SRR4947493 | root | Al | 63.49 | HC |
| SRR4947494 | root | control | 67.77 | HC |
| SRR4947497 | root | control | 130.46 | HC |
| SRR4947498 | root | Al | 151.19 | HC |
| SRR4947499 | root | Al | 91.86 | HC |
| SRR4947500 | root | Al | 126.97 | HC |
| SRR4947501 | root | Al | 139.16 | HC |
| SRR4947502 | root | control | 108.61 | HC |
| SRR4947503 | root | control | 81.70 | HC |
| SRR4947504 | root | control | 123.70 | HC |
| SRR4947505 | root | control | 144.18 | HC |
| SRR4947506 | root | Al | 91.93 | HC |
| SRR4947507 | root | Al | 161.36 | HC |
| SRR4947508 | root | Al | 76.41 | HC |
| SRR4947509 | root | Al | 106.18 | HC |
| SRR6502091 | root | 100 mM NaCl | 17.04 | HC |
| SRR6502092 | root | 100 mM NaCl | 14.06 | HC |
| SRR6502093 | root | 100 mM NaCl | 13.08 | HC |
| SRR6502094 | root | control | 9.26 | HC |
| SRR6502095 | root | control | 6.44 | HC |
| SRR6502096 | root | control | 11.45 | HC |
| SRR6502103 | root | 100 mM NaCl | 13.39 | HC |
| SRR6502104 | root | 100 mM NaCl | 16.82 | HC |
| SRR6502105 | root | 100 mM NaCl | 20.11 | HC |
| SRR6502106 | root | control | 11.94 | HC |
| SRR6502107 | root | control | 5.73 | HC |
| SRR6502108 | root | control | 7.65 | HC |
| SRR1740434 | root_differentiation_zone | wt | 33.63 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.16 | HC |
| SRR6441554 | seedling | wild_type | 39.31 | HC |
| SRR6441555 | seedling | wild_type | 41.47 | HC |
| SRR2154086 | seedling | wt | 42.63 | HC |
| SRR2154082 | seedling | wt | 50.90 | HC |
| SRR2154083 | seedling | wt | 38.14 | HC |
| SRR2154084 | seedling | wt | 28.39 | HC |
| SRR2154085 | seedling | wt | 46.24 | HC |
| SRR2154087 | seedling | wt | 34.69 | HC |
| SRR3098741 | seedling | wt | 13.19 | HC |
| SRR3098742 | seedling | wt | 6.20 | HC |
| SRR3098743 | seedling | wt | 4.17 | HC |
| SRR2857719 | seedling | drought_stress_0h | 25.39 | HC |
| SRR2857720 | seedling | drought_stress_1h | 21.60 | HC |
| SRR2857721 | seedling | drought_stress_6h | 14.70 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 5.39 | HC |
| SRR1944583 | seedling | no_treatment | 6.32 | HC |
| SRR358793 | seedling | wt | 11.29 | HC |
| SRR358794 | seedling | wt | 12.21 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 98.28 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 113.84 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 81.13 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 143.06 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 88.79 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 77.36 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 39.35 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 29.30 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 35.77 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 34.41 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 61.18 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 40.01 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 37.70 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 29.80 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 57.07 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 60.34 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 43.40 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 41.10 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 52.10 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 64.43 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 32.73 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 27.11 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 28.40 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 26.66 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 19.85 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 32.77 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 9.54 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.73 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.23 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.73 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.62 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.66 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 21.68 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 19.37 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 8.20 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 8.82 | HC |