| SRR4457250 | 2nd_leaf | DAH4 | 11.14 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 12.25 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 6.07 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 8.55 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 8.98 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 5.45 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 12.17 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 12.12 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 11.15 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 10.06 | HC |
| SRR358796 | callus | wt | 258.08 | HC |
| SRR358798 | callus | wt | 247.49 | HC |
| SRR5560729 | caryopsis | wild_type | 5.55 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 9.52 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.82 | HC |
| SRR4947495 | root | control | 15.77 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 14.66 | HC |
| SRR7265400 | coleoptile | 2dA | 43.31 | HC |
| SRR7265401 | coleoptile | 2dA | 63.88 | HC |
| SRR7265402 | coleoptile | 2dA | 66.94 | HC |
| SRR7265403 | coleoptile | 2dN | 37.55 | HC |
| SRR7265404 | coleoptile | 2dN | 18.82 | HC |
| SRR7265405 | coleoptile | 2dN | 23.87 | HC |
| SRR7265406 | coleoptile | 3dA | 14.69 | HC |
| SRR7265407 | coleoptile | 3dA | 39.98 | HC |
| SRR7265408 | coleoptile | 3dA | 21.41 | HC |
| SRR7265409 | coleoptile | 3dN | 32.28 | HC |
| SRR7265410 | coleoptile | 3dN | 17.04 | HC |
| SRR7265411 | coleoptile | 3dN | 29.88 | HC |
| SRR7265412 | coleoptile | 4dA | 3.85 | HC |
| SRR7265413 | coleoptile | 4dA | 5.79 | HC |
| SRR7265414 | coleoptile | 4dA | 10.55 | HC |
| SRR7265415 | coleoptile | 4dN | 32.89 | HC |
| SRR7265416 | coleoptile | 4dN | 9.42 | HC |
| SRR7265417 | coleoptile | 4dN | 18.87 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 38.76 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 38.68 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 41.49 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 8.40 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.90 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 4.39 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 9.33 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.56 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 5.57 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 9.35 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.51 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.67 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.10 | HC |
| SRR7265376 | embryo | 1hA | 11.69 | HC |
| SRR7265377 | embryo | 1hA | 13.19 | HC |
| SRR7265378 | embryo | 1hA | 11.62 | HC |
| SRR7265379 | embryo | 1hN | 16.49 | HC |
| SRR7265380 | embryo | 1hN | 6.70 | HC |
| SRR7265381 | embryo | 1hN | 18.35 | HC |
| SRR7265382 | embryo | 3hA | 31.89 | HC |
| SRR7265383 | embryo | 3hA | 34.75 | HC |
| SRR7265384 | embryo | 3hA | 28.35 | HC |
| SRR7265385 | embryo | 3hN | 17.13 | HC |
| SRR7265386 | embryo | 3hN | 19.01 | HC |
| SRR7265387 | embryo | 3hN | 11.60 | HC |
| SRR7265388 | embryo | 12hA | 74.67 | HC |
| SRR7265389 | embryo | 12hA | 26.96 | HC |
| SRR7265390 | embryo | 12hA | 64.08 | HC |
| SRR7265391 | embryo | 12hN | 43.91 | HC |
| SRR7265392 | embryo | 12hN | 59.37 | HC |
| SRR7265393 | embryo | 12hN | 66.64 | HC |
| SRR7265394 | embryo | 24hA | 59.35 | HC |
| SRR7265395 | embryo | 24hA | 46.27 | HC |
| SRR7265396 | embryo | 24hA | 63.35 | HC |
| SRR7265397 | embryo | 24hN | 39.60 | HC |
| SRR7265398 | embryo | 24hN | 48.74 | HC |
| SRR7265399 | embryo | 24hN | 37.72 | HC |
| SRR2338868 | endosprem | high_temperature | 16.96 | HC |
| SRR4457232 | flag_leaf | DAH4 | 8.09 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.61 | HC |
| SRR4457235 | flag_leaf | DAH12 | 24.14 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.59 | HC |
| SRR4457238 | flag_leaf | DAH20 | 29.49 | HC |
| SRR4457242 | flag_leaf | DAH28 | 6.60 | HC |
| SRR4457243 | flag_leaf | DAH36 | 6.45 | HC |
| SRR4457244 | flag_leaf | DAH36 | 5.22 | HC |
| SRR4457245 | flag_leaf | DAH36 | 18.05 | HC |
| SRR4457246 | flag_leaf | DAH44 | 21.84 | HC |
| SRR1213691 | flower | wt | 24.16 | HC |
| SRR8060835 | leaf | wild_type | 9.51 | HC |
| SRR8060836 | leaf | wild_type | 5.85 | HC |
| SRR8060837 | leaf | wild_type | 15.23 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 44.51 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 13.12 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 27.86 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 53.09 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 34.79 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 43.62 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 59.29 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 49.81 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 37.46 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 34.28 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.56 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 14.60 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 34.21 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 25.04 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 49.58 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 21.36 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 39.39 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 29.59 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 34.53 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 18.28 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 36.06 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 40.14 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 37.00 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 71.02 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 41.61 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 30.47 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.86 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 33.05 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.31 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 39.60 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 25.73 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 28.66 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 16.96 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 16.10 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 28.66 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 16.96 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 16.10 | HC |
| SRR1761528 | leaf | drought | 28.66 | HC |
| SRR1761529 | leaf | drought | 16.96 | HC |
| SRR1761531 | leaf | control | 16.10 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 10.63 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 27.66 | HC |
| SRR6417967 | leaf | H2O_control | 8.23 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 13.60 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 22.47 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.87 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 4.42 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.74 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 6.91 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 5.20 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 16.19 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.68 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 6.17 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.78 | HC |
| SRR8611901 | leaf | Non-inoculated | 9.15 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.14 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 6.03 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.98 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.53 | HC |
| SRR1213692 | leaf | wt | 40.22 | HC |
| SRR1213693 | leaf | wt | 59.07 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 7.27 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.66 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 24.29 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.13 | HC |
| SRR6502102 | leaf | control | 10.51 | HC |
| SRR5856927 | leaf | control | 4.77 | HC |
| SRR5856929 | leaf | control | 3.25 | HC |
| SRR5856931 | leaf | salt | 5.24 | HC |
| SRR5856935 | leaf | control | 3.50 | HC |
| SRR5856936 | leaf | salt | 2.33 | HC |
| SRR5856937 | leaf | salt | 7.57 | HC |
| SRR5856938 | leaf | salt | 2.37 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 10.39 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 38.99 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 18.20 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 47.27 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 18.03 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 8.96 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 18.50 | HC |
| SRR6168973 | leaf | none (control) | 6.35 | HC |
| SRR6168974 | leaf | none (control) | 10.69 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.41 | HC |
| SRR6168979 | leaf | none (control) | 8.46 | HC |
| SRR6168980 | leaf | none (control) | 2.07 | HC |
| SRR6168981 | leaf | none (control) | 2.89 | HC |
| SRR4947496 | root | control | 23.95 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 10.96 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 16.82 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.31 | HC |
| SRR5126148 | root | "mock,1_day" | 4.03 | HC |
| SRR5126149 | root | "mock,1_day" | 15.55 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.10 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.88 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 13.94 | HC |
| SRR5126153 | root | "mock,7_days" | 6.16 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.75 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 9.72 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.90 | HC |
| SRR5126167 | root | "mock,14_days" | 6.32 | HC |
| SRR5126169 | root | "mock,14_days" | 5.79 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 22.21 | HC |
| SRR1213694 | root | wt | 10.05 | HC |
| SRR1213695 | root | wt | 73.30 | HC |
| SRR4947478 | root | control | 12.48 | HC |
| SRR4947479 | root | control | 8.58 | HC |
| SRR4947480 | root | control | 11.58 | HC |
| SRR4947481 | root | control | 13.16 | HC |
| SRR4947482 | root | Al | 59.29 | HC |
| SRR4947483 | root | Al | 19.52 | HC |
| SRR4947484 | root | Al | 14.94 | HC |
| SRR4947485 | root | Al | 6.33 | HC |
| SRR4947487 | root | control | 12.75 | HC |
| SRR4947488 | root | control | 11.75 | HC |
| SRR4947489 | root | control | 12.80 | HC |
| SRR4947490 | root | Al | 9.29 | HC |
| SRR4947491 | root | Al | 25.45 | HC |
| SRR4947492 | root | Al | 34.20 | HC |
| SRR4947493 | root | Al | 22.46 | HC |
| SRR4947494 | root | control | 15.09 | HC |
| SRR4947497 | root | control | 45.44 | HC |
| SRR4947498 | root | Al | 26.92 | HC |
| SRR4947499 | root | Al | 21.55 | HC |
| SRR4947500 | root | Al | 24.68 | HC |
| SRR4947501 | root | Al | 25.73 | HC |
| SRR4947502 | root | control | 27.63 | HC |
| SRR4947503 | root | control | 15.53 | HC |
| SRR4947504 | root | control | 23.53 | HC |
| SRR4947505 | root | control | 20.09 | HC |
| SRR4947506 | root | Al | 10.96 | HC |
| SRR4947507 | root | Al | 21.39 | HC |
| SRR4947508 | root | Al | 35.60 | HC |
| SRR4947509 | root | Al | 24.88 | HC |
| SRR6502095 | root | control | 21.88 | HC |
| SRR6502103 | root | 100 mM NaCl | 11.08 | HC |
| SRR1740434 | root_differentiation_zone | wt | 7.60 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.49 | HC |
| SRR1740436 | root_differentiation_zone | wt | 12.44 | HC |
| SRR1740431 | root_elongation_zone | wt | 6.58 | HC |
| SRR1740432 | root_elongation_zone | wt | 31.44 | HC |
| SRR1740433 | root_elongation_zone | wt | 34.12 | HC |
| SRR1740428 | root_meristematic_zone | wt | 7.35 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.78 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.62 | HC |
| SRR2154086 | seedling | wt | 19.35 | HC |
| SRR2154082 | seedling | wt | 41.58 | HC |
| SRR2154083 | seedling | wt | 6.79 | HC |
| SRR2154084 | seedling | wt | 26.26 | HC |
| SRR2154085 | seedling | wt | 73.86 | HC |
| SRR3098741 | seedling | wt | 3.85 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.53 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.02 | HC |
| SRR358791 | seedling | wt | 107.15 | HC |
| SRR358792 | seedling | wt | 104.20 | HC |
| SRR358793 | seedling | wt | 165.06 | HC |
| SRR358794 | seedling | wt | 157.28 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 140.69 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 29.29 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 130.74 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 23.75 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 42.80 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 62.01 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 69.47 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 57.88 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 17.02 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 100.83 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 88.41 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 69.32 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 111.95 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 69.42 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 55.00 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 24.02 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 14.11 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 22.76 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 21.86 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 37.86 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 42.38 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.48 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.98 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 8.08 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.52 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 7.48 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 8.46 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 49.55 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 56.78 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 39.54 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 51.38 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 15.85 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 10.49 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 312.18 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 12.73 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 14.26 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 14.62 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 16.47 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 7.37 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 14.63 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 16.94 | HC |