| SRR5560727 | caryopsis | wild_type | 11.17 | HC |
| SRR5560728 | caryopsis | wild_type | 14.53 | HC |
| SRR5560729 | caryopsis | wild_type | 13.87 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 11.49 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 10.71 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 11.89 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 9.63 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 18.79 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 20.86 | HC |
| SRR2338868 | endosprem | high_temperature | 2.67 | HC |
| SRR1213691 | flower | wt | 4.89 | HC |
| SRR8240824 | leaf | wild_type | 6.23 | HC |
| SRR8240825 | leaf | wild_type | 6.18 | HC |
| SRR8240826 | leaf | wild_type | 2.50 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 17.19 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 15.92 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 13.95 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 14.77 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.68 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 7.01 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.44 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.98 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.57 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.98 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 8.55 | HC |
| SRR8611900 | leaf | Non-inoculated | 9.20 | HC |
| SRR8611901 | leaf | Non-inoculated | 8.45 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.31 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 10.99 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 12.14 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 13.33 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 9.22 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 10.14 | HC |
| SRR1213693 | leaf | wt | 4.11 | HC |
| SRR6168973 | leaf | none (control) | 22.14 | HC |
| SRR6168974 | leaf | none (control) | 31.95 | HC |
| SRR6168975 | leaf | none (control) | 18.43 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 64.05 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 12.50 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 59.69 | HC |
| SRR6168979 | leaf | none (control) | 3.84 | HC |
| SRR6168980 | leaf | none (control) | 4.41 | HC |
| SRR6168981 | leaf | none (control) | 11.34 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 41.84 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 45.51 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 64.45 | HC |
| SRR8582889 | panicle | AM | 2.26 | HC |
| SRR8582891 | panicle | PM | 17.92 | HC |
| SRR8582892 | panicle | PM | 9.49 | HC |
| SRR8582893 | panicle | PM | 26.25 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.08 | HC |
| SRR1633182 | panicle | WT | 9.13 | HC |
| SRR1633185 | panicle | WT | 9.99 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 8.52 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 8.31 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 11.62 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 11.29 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 14.09 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 18.13 | HC |
| SRR5126147 | root | "mock,1_day" | 12.37 | HC |
| SRR5126148 | root | "mock,1_day" | 19.01 | HC |
| SRR5126149 | root | "mock,1_day" | 12.94 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.64 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.11 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 10.34 | HC |
| SRR5126153 | root | "mock,7_days" | 9.09 | HC |
| SRR5126155 | root | "mock,7_days" | 13.83 | HC |
| SRR5126157 | root | "mock,7_days" | 7.39 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.24 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.21 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 10.62 | HC |
| SRR5126165 | root | "mock,14_days" | 5.68 | HC |
| SRR5126167 | root | "mock,14_days" | 6.64 | HC |
| SRR5126169 | root | "mock,14_days" | 12.65 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.98 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.31 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.66 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 7.20 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 6.98 | HC |
| SRR1740435 | root_differentiation_zone | wt | 6.38 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.32 | HC |
| SRR1740431 | root_elongation_zone | wt | 10.24 | HC |
| SRR1740432 | root_elongation_zone | wt | 9.08 | HC |
| SRR1740433 | root_elongation_zone | wt | 11.97 | HC |
| SRR1740428 | root_meristematic_zone | wt | 6.72 | HC |
| SRR1740429 | root_meristematic_zone | wt | 6.86 | HC |
| SRR1740430 | root_meristematic_zone | wt | 8.23 | HC |
| SRR6441554 | seedling | wild_type | 10.32 | HC |
| SRR6441555 | seedling | wild_type | 11.62 | HC |
| SRR2154086 | seedling | wt | 14.37 | HC |
| SRR2154085 | seedling | wt | 6.37 | HC |
| SRR2154087 | seedling | wt | 11.66 | HC |
| SRR3098741 | seedling | wt | 3.71 | HC |
| SRR3098742 | seedling | wt | 5.49 | HC |
| SRR3098743 | seedling | wt | 5.37 | HC |
| SRR2857721 | seedling | drought_stress_6h | 6.84 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.98 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 10.62 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 8.72 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.58 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 17.51 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 15.45 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 13.75 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.95 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.06 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 17.39 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.41 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.58 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 5.47 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.91 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 9.80 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 7.91 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 8.85 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 8.58 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 5.37 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 8.41 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 8.60 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.16 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.22 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.35 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.10 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.88 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.28 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.28 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.93 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.04 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 5.42 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 8.14 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.91 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 9.52 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 9.19 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 11.56 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.07 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 20.56 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 23.64 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 25.04 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 16.62 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 17.67 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 15.37 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 17.57 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 17.50 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 19.82 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.44 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 5.27 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 3.08 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.30 | HC |