| SRR4457251 | 2nd_leaf | DAH4 | 4.13 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 5.02 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 7.06 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.87 | HC |
| SRR7265377 | embryo | 1hA | 6.77 | HC |
| SRR7265378 | embryo | 1hA | 5.84 | HC |
| SRR7265384 | embryo | 3hA | 8.00 | HC |
| SRR7265389 | embryo | 12hA | 7.13 | HC |
| SRR7265395 | embryo | 24hA | 6.23 | HC |
| SRR7265399 | embryo | 24hN | 6.74 | HC |
| SRR2338867 | endosprem | control | 5.36 | HC |
| SRR2338868 | endosprem | high_temperature | 5.20 | HC |
| SRR2338869 | endosprem | high_temperature | 5.56 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.22 | HC |
| SRR4457234 | flag_leaf | DAH12 | 4.05 | HC |
| SRR4457235 | flag_leaf | DAH12 | 7.91 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.54 | HC |
| SRR4457240 | flag_leaf | DAH28 | 9.29 | HC |
| SRR4457241 | flag_leaf | DAH28 | 10.07 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.33 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.68 | HC |
| SRR8240825 | leaf | wild_type | 5.14 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.46 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.67 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.38 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.77 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.59 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.12 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.05 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.70 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.32 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.47 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.83 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.53 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.60 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.38 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.58 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.23 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.80 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.32 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.86 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.95 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.26 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.21 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 7.32 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 10.95 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 6.26 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 7.54 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 10.54 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 6.57 | HC |
| SRR1761528 | leaf | drought | 8.85 | HC |
| SRR1761529 | leaf | drought | 10.18 | HC |
| SRR1761531 | leaf | control | 6.33 | HC |
| SRR504365 | leaf | wt | 10.61 | HC |
| SRR6417968 | leaf | H2O_control | 4.16 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.35 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 8.72 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.19 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 5.77 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 8.13 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 10.29 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.61 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.20 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 5.64 | HC |
| SRR8611900 | leaf | Non-inoculated | 4.38 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.47 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.41 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 5.30 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.88 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.48 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.60 | HC |
| SRR1213693 | leaf | wt | 5.97 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 7.76 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.46 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.80 | HC |
| SRR5856927 | leaf | control | 7.56 | HC |
| SRR5856928 | leaf | control | 7.00 | HC |
| SRR5856937 | leaf | salt | 6.74 | HC |
| SRR5856938 | leaf | salt | 4.21 | HC |
| SRR8582889 | panicle | AM | 2.98 | HC |
| SRR8582890 | panicle | AM | 3.70 | HC |
| SRR8582893 | panicle | PM | 7.25 | HC |
| SRR5110451 | panicle | Dawn + 14h | 3.85 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.46 | HC |
| SRR1633182 | panicle | WT | 20.94 | HC |
| SRR1633185 | panicle | WT | 42.53 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 4.51 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 4.79 | HC |
| SRR5126147 | root | "mock,1_day" | 6.54 | HC |
| SRR5126149 | root | "mock,1_day" | 10.06 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 8.80 | HC |
| SRR5126153 | root | "mock,7_days" | 5.67 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.51 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.51 | HC |
| SRR5126165 | root | "mock,14_days" | 9.18 | HC |
| SRR5126169 | root | "mock,14_days" | 8.73 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.90 | HC |
| SRR1213694 | root | wt | 4.24 | HC |
| SRR1213695 | root | wt | 5.65 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.93 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.56 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.47 | HC |
| SRR1740435 | root_differentiation_zone | wt | 5.73 | HC |
| SRR1740436 | root_differentiation_zone | wt | 8.99 | HC |
| SRR1740433 | root_elongation_zone | wt | 11.80 | HC |
| SRR1740429 | root_meristematic_zone | wt | 8.89 | HC |
| SRR1740430 | root_meristematic_zone | wt | 12.39 | HC |
| SRR6441554 | seedling | wild_type | 4.04 | HC |
| SRR6441555 | seedling | wild_type | 4.31 | HC |
| SRR2154086 | seedling | wt | 7.83 | HC |
| SRR2154083 | seedling | wt | 4.05 | HC |
| SRR2154085 | seedling | wt | 12.49 | HC |
| SRR2154087 | seedling | wt | 7.32 | HC |
| SRR3098741 | seedling | wt | 4.02 | HC |
| SRR3098742 | seedling | wt | 3.54 | HC |
| SRR3098743 | seedling | wt | 3.19 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.85 | HC |
| SRR1944583 | seedling | no_treatment | 5.36 | HC |
| SRR358791 | seedling | wt | 16.10 | HC |
| SRR358792 | seedling | wt | 20.61 | HC |
| SRR358793 | seedling | wt | 10.73 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 9.26 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.63 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 27.78 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 27.98 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 34.84 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 37.63 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 26.44 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 15.53 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 12.65 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 12.36 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 16.91 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.53 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 6.14 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.54 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 6.81 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 10.01 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 11.36 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 7.31 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 5.45 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 8.18 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.22 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.30 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.45 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.11 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.90 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.01 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.88 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.06 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.71 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.12 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.10 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 11.73 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 11.64 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 11.11 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 9.48 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.06 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.25 | HC |