| SRR4457253 | 2nd_leaf | DAH12 | 5.31 | HC |
| SRR3745125 | anther | wt | 12.41 | HC |
| SRR3745126 | anther | wt | 12.22 | HC |
| SRR3745127 | anther | wt | 11.62 | HC |
| SRR358795 | callus | wt | 42.39 | HC |
| SRR358796 | callus | wt | 41.85 | HC |
| SRR358797 | callus | wt | 42.37 | HC |
| SRR358798 | callus | wt | 42.76 | HC |
| SRR5560727 | caryopsis | wild_type | 10.30 | HC |
| SRR5560728 | caryopsis | wild_type | 10.28 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 13.70 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 17.91 | HC |
| SRR4947495 | root | control | 4.97 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 14.34 | HC |
| SRR7265400 | coleoptile | 2dA | 29.33 | HC |
| SRR7265401 | coleoptile | 2dA | 39.61 | HC |
| SRR7265402 | coleoptile | 2dA | 8.92 | HC |
| SRR7265403 | coleoptile | 2dN | 6.89 | HC |
| SRR7265404 | coleoptile | 2dN | 27.30 | HC |
| SRR7265405 | coleoptile | 2dN | 28.67 | HC |
| SRR7265406 | coleoptile | 3dA | 17.13 | HC |
| SRR7265407 | coleoptile | 3dA | 15.01 | HC |
| SRR7265408 | coleoptile | 3dA | 4.73 | HC |
| SRR7265409 | coleoptile | 3dN | 6.53 | HC |
| SRR7265410 | coleoptile | 3dN | 23.57 | HC |
| SRR7265411 | coleoptile | 3dN | 23.83 | HC |
| SRR7265412 | coleoptile | 4dA | 5.73 | HC |
| SRR7265413 | coleoptile | 4dA | 17.72 | HC |
| SRR7265414 | coleoptile | 4dA | 5.89 | HC |
| SRR7265415 | coleoptile | 4dN | 6.52 | HC |
| SRR7265416 | coleoptile | 4dN | 6.68 | HC |
| SRR7265417 | coleoptile | 4dN | 6.11 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 8.28 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 15.19 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 6.29 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 12.93 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 10.63 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 13.12 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 14.34 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 10.46 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 16.56 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 7.47 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.34 | HC |
| SRR7265373 | embryo | dry seed 0 h | 12.97 | HC |
| SRR7265374 | embryo | dry seed 0 h | 8.73 | HC |
| SRR7265375 | embryo | dry seed 0 h | 4.22 | HC |
| SRR7265376 | embryo | 1hA | 12.98 | HC |
| SRR7265377 | embryo | 1hA | 4.68 | HC |
| SRR7265378 | embryo | 1hA | 10.02 | HC |
| SRR7265379 | embryo | 1hN | 4.82 | HC |
| SRR7265381 | embryo | 1hN | 7.00 | HC |
| SRR7265382 | embryo | 3hA | 5.83 | HC |
| SRR7265383 | embryo | 3hA | 10.68 | HC |
| SRR7265386 | embryo | 3hN | 8.46 | HC |
| SRR7265388 | embryo | 12hA | 38.48 | HC |
| SRR7265389 | embryo | 12hA | 35.69 | HC |
| SRR7265390 | embryo | 12hA | 30.67 | HC |
| SRR7265391 | embryo | 12hN | 8.88 | HC |
| SRR7265392 | embryo | 12hN | 22.35 | HC |
| SRR7265393 | embryo | 12hN | 31.72 | HC |
| SRR7265394 | embryo | 24hA | 35.82 | HC |
| SRR7265395 | embryo | 24hA | 36.28 | HC |
| SRR7265396 | embryo | 24hA | 28.73 | HC |
| SRR7265397 | embryo | 24hN | 40.29 | HC |
| SRR7265398 | embryo | 24hN | 6.61 | HC |
| SRR7265399 | embryo | 24hN | 26.46 | HC |
| SRR2338866 | endosprem | control | 22.74 | HC |
| SRR976168 | flag_leaf | wild_type | 19.28 | HC |
| SRR4457232 | flag_leaf | DAH4 | 5.23 | HC |
| SRR1213690 | flower | wt(flower buds) | 10.25 | HC |
| SRR1213691 | flower | wt | 13.30 | HC |
| SRR8060835 | leaf | wild_type | 5.41 | HC |
| SRR8060836 | leaf | wild_type | 7.41 | HC |
| SRR8060837 | leaf | wild_type | 4.58 | HC |
| SRR8240825 | leaf | wild_type | 3.97 | HC |
| SRR8240818 | leaf | wild_type | 3.48 | HC |
| SRR8240820 | leaf | wild_type | 2.81 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.68 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 8.45 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 12.09 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 9.21 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.82 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.88 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.99 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.28 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.96 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.21 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.73 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 22.66 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 20.06 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 16.61 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 14.41 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 22.63 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 20.06 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 16.61 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 14.42 | HC |
| SRR1761528 | leaf | drought | 22.67 | HC |
| SRR1761529 | leaf | drought | 20.05 | HC |
| SRR1761530 | leaf | control | 16.61 | HC |
| SRR1761531 | leaf | control | 14.41 | HC |
| SRR504365 | leaf | wt | 30.61 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.54 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.93 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 13.10 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 12.83 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 25.85 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 25.64 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 13.14 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 16.43 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 20.76 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 23.27 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 11.50 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 26.62 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 13.23 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 21.22 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.29 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.05 | HC |
| SRR8611902 | leaf | Non-inoculated | 6.45 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.94 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 7.25 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 12.11 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 11.05 | HC |
| SRR1213692 | leaf | wt | 9.69 | HC |
| SRR1213693 | leaf | wt | 11.59 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 20.09 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 21.99 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 23.34 | HC |
| SRR6502088 | leaf | control | 18.53 | HC |
| SRR6502089 | leaf | control | 12.86 | HC |
| SRR6502090 | leaf | control | 13.80 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 16.57 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 22.29 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 9.33 | HC |
| SRR6502100 | leaf | control | 13.09 | HC |
| SRR6502101 | leaf | control | 11.84 | HC |
| SRR6502102 | leaf | control | 13.43 | HC |
| SRR5856927 | leaf | control | 10.48 | HC |
| SRR5856928 | leaf | control | 9.99 | HC |
| SRR5856929 | leaf | control | 6.31 | HC |
| SRR5856930 | leaf | salt | 9.69 | HC |
| SRR5856931 | leaf | salt | 8.14 | HC |
| SRR5856932 | leaf | salt | 10.12 | HC |
| SRR5856933 | leaf | control | 9.91 | HC |
| SRR5856934 | leaf | control | 11.99 | HC |
| SRR5856935 | leaf | control | 10.78 | HC |
| SRR5856936 | leaf | salt | 8.46 | HC |
| SRR5856937 | leaf | salt | 12.55 | HC |
| SRR5856938 | leaf | salt | 10.99 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 9.68 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 15.13 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 13.59 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 13.53 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 16.14 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 16.55 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 13.57 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 11.91 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 10.65 | HC |
| SRR6168973 | leaf | none (control) | 6.91 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.85 | HC |
| SRR6168980 | leaf | none (control) | 4.10 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.36 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 7.65 | HC |
| SRR8582893 | panicle | PM | 11.33 | HC |
| SRR5110429 | panicle | Dawn | 6.11 | HC |
| SRR5110430 | panicle | Dawn | 16.16 | HC |
| SRR5110431 | panicle | Dawn | 5.71 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 8.07 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.26 | HC |
| SRR5110437 | panicle | Dawn + 7h | 4.65 | HC |
| SRR5110439 | panicle | Dawn + 7h | 11.23 | HC |
| SRR5110440 | panicle | Dawn + 7h | 6.24 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.70 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 4.38 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.84 | HC |
| SRR5110446 | panicle | Dusk | 5.81 | HC |
| SRR5110447 | panicle | Dusk | 5.16 | HC |
| SRR5110448 | panicle | Dusk | 6.33 | HC |
| SRR5110449 | panicle | Dawn + 14h | 8.72 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.06 | HC |
| SRR5110451 | panicle | Dawn + 14h | 13.84 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.11 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 5.98 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.15 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.15 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.78 | HC |
| SRR1633182 | panicle | WT | 24.12 | HC |
| SRR1633185 | panicle | WT | 31.96 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 5.93 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.48 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 13.92 | HC |
| SRR5126147 | root | "mock,1_day" | 19.97 | HC |
| SRR5126148 | root | "mock,1_day" | 18.72 | HC |
| SRR5126149 | root | "mock,1_day" | 16.04 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 25.57 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 22.84 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 21.76 | HC |
| SRR5126155 | root | "mock,7_days" | 10.12 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 17.13 | HC |
| SRR5126167 | root | "mock,14_days" | 8.93 | HC |
| SRR5126169 | root | "mock,14_days" | 12.35 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 9.84 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 12.87 | HC |
| SRR1213695 | root | wt | 4.07 | HC |
| SRR4947482 | root | Al | 18.22 | HC |
| SRR4947507 | root | Al | 7.52 | HC |
| SRR4947509 | root | Al | 12.96 | HC |
| SRR6502091 | root | 100 mM NaCl | 34.72 | HC |
| SRR6502092 | root | 100 mM NaCl | 29.20 | HC |
| SRR6502093 | root | 100 mM NaCl | 34.34 | HC |
| SRR6502094 | root | control | 30.56 | HC |
| SRR6502095 | root | control | 30.60 | HC |
| SRR6502096 | root | control | 30.32 | HC |
| SRR6502103 | root | 100 mM NaCl | 36.18 | HC |
| SRR6502104 | root | 100 mM NaCl | 35.99 | HC |
| SRR6502105 | root | 100 mM NaCl | 28.51 | HC |
| SRR6502106 | root | control | 28.59 | HC |
| SRR6502107 | root | control | 33.46 | HC |
| SRR6502108 | root | control | 39.06 | HC |
| SRR1740434 | root_differentiation_zone | wt | 14.58 | HC |
| SRR1740435 | root_differentiation_zone | wt | 40.66 | HC |
| SRR1740436 | root_differentiation_zone | wt | 31.50 | HC |
| SRR1740431 | root_elongation_zone | wt | 46.10 | HC |
| SRR1740432 | root_elongation_zone | wt | 47.62 | HC |
| SRR1740433 | root_elongation_zone | wt | 44.84 | HC |
| SRR1740428 | root_meristematic_zone | wt | 39.57 | HC |
| SRR1740429 | root_meristematic_zone | wt | 33.49 | HC |
| SRR1740430 | root_meristematic_zone | wt | 28.18 | HC |
| SRR3098742 | seedling | wt | 3.89 | HC |
| SRR3098743 | seedling | wt | 4.01 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.89 | HC |
| SRR2857720 | seedling | drought_stress_1h | 7.19 | HC |
| SRR1944583 | seedling | no_treatment | 12.06 | HC |
| SRR358791 | seedling | wt | 32.80 | HC |
| SRR358792 | seedling | wt | 33.01 | HC |
| SRR358793 | seedling | wt | 16.33 | HC |
| SRR358794 | seedling | wt | 16.09 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.91 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 9.48 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.13 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.74 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.72 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 10.06 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 8.65 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.39 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 9.34 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 7.16 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 5.64 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.96 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 7.61 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.97 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 6.78 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 10.50 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 6.87 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.59 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.93 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.92 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 8.46 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.14 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.39 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 10.43 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.31 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 24.87 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 21.89 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 23.22 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 20.22 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 23.40 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 19.81 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 22.33 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 22.91 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 20.39 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 20.15 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 21.88 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 22.65 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 22.19 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 22.73 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 21.29 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 23.74 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 23.18 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 27.64 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 28.28 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 21.76 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 32.28 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 22.71 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 27.13 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 27.49 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 30.78 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 6.06 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 18.24 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 4.92 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 25.62 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.90 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.25 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 14.73 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 14.94 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 15.73 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.71 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 8.59 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 9.14 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 10.52 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.98 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 12.52 | HC |