| SRR4457257 | 2nd_leaf | DAH20 | 4.76 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 5.78 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.31 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 6.24 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 7.72 | HC |
| SRR6320473 | carpel | wt | 41.15 | HC |
| SRR6320498 | carpel | wt | 40.12 | HC |
| SRR5560729 | caryopsis | wild_type | 5.38 | HC |
| SRR7265400 | coleoptile | 2dA | 7.97 | HC |
| SRR7265401 | coleoptile | 2dA | 7.74 | HC |
| SRR7265402 | coleoptile | 2dA | 7.48 | HC |
| SRR7265403 | coleoptile | 2dN | 6.84 | HC |
| SRR7265404 | coleoptile | 2dN | 6.99 | HC |
| SRR7265405 | coleoptile | 2dN | 7.68 | HC |
| SRR7265406 | coleoptile | 3dA | 6.67 | HC |
| SRR7265407 | coleoptile | 3dA | 6.01 | HC |
| SRR7265408 | coleoptile | 3dA | 3.23 | HC |
| SRR7265409 | coleoptile | 3dN | 8.09 | HC |
| SRR7265410 | coleoptile | 3dN | 5.63 | HC |
| SRR7265411 | coleoptile | 3dN | 5.35 | HC |
| SRR7265412 | coleoptile | 4dA | 4.68 | HC |
| SRR7265413 | coleoptile | 4dA | 10.02 | HC |
| SRR7265414 | coleoptile | 4dA | 6.80 | HC |
| SRR7265416 | coleoptile | 4dN | 4.82 | HC |
| SRR7265417 | coleoptile | 4dN | 5.92 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 7.19 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 7.41 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 6.43 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.31 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.84 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 4.92 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 6.30 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.91 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.48 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 5.55 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 6.36 | HC |
| SRR7265373 | embryo | dry seed 0 h | 13.07 | HC |
| SRR7265374 | embryo | dry seed 0 h | 14.40 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.88 | HC |
| SRR7265376 | embryo | 1hA | 9.29 | HC |
| SRR7265377 | embryo | 1hA | 13.28 | HC |
| SRR7265378 | embryo | 1hA | 11.10 | HC |
| SRR7265379 | embryo | 1hN | 12.53 | HC |
| SRR7265380 | embryo | 1hN | 9.81 | HC |
| SRR7265381 | embryo | 1hN | 11.91 | HC |
| SRR7265382 | embryo | 3hA | 10.28 | HC |
| SRR7265383 | embryo | 3hA | 14.34 | HC |
| SRR7265384 | embryo | 3hA | 11.81 | HC |
| SRR7265385 | embryo | 3hN | 9.85 | HC |
| SRR7265386 | embryo | 3hN | 10.18 | HC |
| SRR7265387 | embryo | 3hN | 9.58 | HC |
| SRR7265388 | embryo | 12hA | 8.82 | HC |
| SRR7265389 | embryo | 12hA | 6.82 | HC |
| SRR7265390 | embryo | 12hA | 7.42 | HC |
| SRR7265391 | embryo | 12hN | 6.12 | HC |
| SRR7265392 | embryo | 12hN | 6.14 | HC |
| SRR7265393 | embryo | 12hN | 7.28 | HC |
| SRR7265394 | embryo | 24hA | 7.51 | HC |
| SRR7265395 | embryo | 24hA | 10.04 | HC |
| SRR7265396 | embryo | 24hA | 6.96 | HC |
| SRR7265397 | embryo | 24hN | 7.35 | HC |
| SRR7265398 | embryo | 24hN | 6.38 | HC |
| SRR7265399 | embryo | 24hN | 6.24 | HC |
| SRR4457243 | flag_leaf | DAH36 | 5.47 | HC |
| SRR4457246 | flag_leaf | DAH44 | 6.26 | HC |
| SRR4457248 | flag_leaf | DAH44 | 9.58 | HC |
| SRR8060837 | leaf | wild_type | 2.92 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.13 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.86 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.86 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.62 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.08 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.31 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 13.10 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.78 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.24 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.25 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.19 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.55 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.01 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 9.49 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.09 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.56 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.92 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.08 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.80 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.84 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 12.38 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.78 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.02 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.58 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 11.23 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.96 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 12.99 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.03 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 8.74 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.71 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 8.74 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.71 | HC |
| SRR1761528 | leaf | drought | 8.74 | HC |
| SRR1761529 | leaf | drought | 7.71 | HC |
| SRR504365 | leaf | wt | 14.37 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 8.55 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.05 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.82 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 5.33 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.16 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.70 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 4.96 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 6.59 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 4.81 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.77 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.68 | HC |
| SRR1213692 | leaf | wt | 5.54 | HC |
| SRR1213693 | leaf | wt | 4.52 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 4.87 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.42 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 8.18 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.57 | HC |
| SRR5856927 | leaf | control | 2.67 | HC |
| SRR5856928 | leaf | control | 3.26 | HC |
| SRR5856929 | leaf | control | 3.27 | HC |
| SRR5856930 | leaf | salt | 2.77 | HC |
| SRR5856931 | leaf | salt | 2.45 | HC |
| SRR5856932 | leaf | salt | 2.77 | HC |
| SRR5856933 | leaf | control | 2.82 | HC |
| SRR5856934 | leaf | control | 2.41 | HC |
| SRR5856935 | leaf | control | 3.83 | HC |
| SRR5856936 | leaf | salt | 3.44 | HC |
| SRR5856937 | leaf | salt | 2.28 | HC |
| SRR5856938 | leaf | salt | 3.88 | HC |
| SRR6168980 | leaf | none (control) | 1.94 | HC |
| SRR6168981 | leaf | none (control) | 6.76 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.55 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 6.33 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 5.22 | HC |
| SRR8582888 | panicle | AM | 3.36 | HC |
| SRR8582891 | panicle | PM | 6.50 | HC |
| SRR8582892 | panicle | PM | 8.80 | HC |
| SRR8582893 | panicle | PM | 5.64 | HC |
| SRR5110429 | panicle | Dawn | 6.48 | HC |
| SRR5110431 | panicle | Dawn | 6.81 | HC |
| SRR5110432 | panicle | Dawn | 5.41 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.56 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 6.67 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 5.29 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.30 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.89 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 6.55 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 6.56 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.14 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.17 | HC |
| SRR5110445 | panicle | Dusk | 4.86 | HC |
| SRR5110446 | panicle | Dusk | 6.91 | HC |
| SRR5110447 | panicle | Dusk | 4.35 | HC |
| SRR5110448 | panicle | Dusk | 8.36 | HC |
| SRR5110449 | panicle | Dawn + 14h | 6.72 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.06 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.03 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.69 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 6.34 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.86 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 5.94 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.65 | HC |
| SRR5110458 | panicle | Dawn + 21h | 5.71 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.24 | HC |
| SRR5110460 | panicle | Dawn + 21h | 10.56 | HC |
| SRR1633182 | panicle | WT | 60.37 | HC |
| SRR1633185 | panicle | WT | 87.22 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 8.95 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 9.76 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 8.29 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 8.38 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 8.45 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 6.86 | HC |
| SRR5126147 | root | "mock,1_day" | 7.57 | HC |
| SRR5126148 | root | "mock,1_day" | 6.53 | HC |
| SRR5126149 | root | "mock,1_day" | 10.18 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 10.61 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 10.53 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.45 | HC |
| SRR5126153 | root | "mock,7_days" | 7.43 | HC |
| SRR5126155 | root | "mock,7_days" | 8.07 | HC |
| SRR5126157 | root | "mock,7_days" | 9.59 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.07 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.48 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.14 | HC |
| SRR5126165 | root | "mock,14_days" | 8.24 | HC |
| SRR5126167 | root | "mock,14_days" | 7.88 | HC |
| SRR5126169 | root | "mock,14_days" | 8.15 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.95 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 8.98 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.78 | HC |
| SRR1213694 | root | wt | 3.43 | HC |
| SRR1213695 | root | wt | 5.30 | HC |
| SRR4947482 | root | Al | 4.01 | HC |
| SRR4947483 | root | Al | 4.47 | HC |
| SRR4947506 | root | Al | 4.27 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.89 | HC |
| SRR6502092 | root | 100 mM NaCl | 8.19 | HC |
| SRR6502094 | root | control | 6.65 | HC |
| SRR6502095 | root | control | 5.65 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.99 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.70 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.26 | HC |
| SRR6502106 | root | control | 7.34 | HC |
| SRR6502107 | root | control | 8.05 | HC |
| SRR6502108 | root | control | 8.17 | HC |
| SRR1740436 | root_differentiation_zone | wt | 4.08 | HC |
| SRR2154084 | seedling | wt | 4.61 | HC |
| SRR3098741 | seedling | wt | 3.44 | HC |
| SRR3098742 | seedling | wt | 3.76 | HC |
| SRR3098743 | seedling | wt | 4.10 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.36 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.89 | HC |
| SRR2857721 | seedling | drought_stress_6h | 11.78 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.60 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 6.09 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.33 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.16 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 13.40 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.62 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.13 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.36 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.95 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.38 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.17 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 7.03 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 7.55 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.15 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 4.66 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.37 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 6.74 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 5.34 | HC |