| SRR3745125 | anther | wt | 10.88 | HC |
| SRR3745126 | anther | wt | 8.52 | HC |
| SRR3745127 | anther | wt | 9.21 | HC |
| SRR358795 | callus | wt | 653.45 | HC |
| SRR358796 | callus | wt | 603.15 | HC |
| SRR358797 | callus | wt | 678.50 | HC |
| SRR358798 | callus | wt | 712.46 | HC |
| SRR6320473 | carpel | wt | 9.40 | HC |
| SRR5560729 | caryopsis | wild_type | 6.71 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 24.07 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 20.26 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 20.72 | HC |
| SRR4947495 | root | control | 34.87 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.92 | HC |
| SRR7265400 | coleoptile | 2dA | 38.05 | HC |
| SRR7265401 | coleoptile | 2dA | 38.20 | HC |
| SRR7265402 | coleoptile | 2dA | 33.40 | HC |
| SRR7265403 | coleoptile | 2dN | 630.40 | HC |
| SRR7265404 | coleoptile | 2dN | 392.81 | HC |
| SRR7265405 | coleoptile | 2dN | 238.80 | HC |
| SRR7265406 | coleoptile | 3dA | 28.79 | HC |
| SRR7265407 | coleoptile | 3dA | 25.61 | HC |
| SRR7265408 | coleoptile | 3dA | 15.98 | HC |
| SRR7265409 | coleoptile | 3dN | 1141.49 | HC |
| SRR7265410 | coleoptile | 3dN | 83.48 | HC |
| SRR7265411 | coleoptile | 3dN | 236.56 | HC |
| SRR7265412 | coleoptile | 4dA | 11.52 | HC |
| SRR7265413 | coleoptile | 4dA | 375.46 | HC |
| SRR7265414 | coleoptile | 4dA | 17.27 | HC |
| SRR7265415 | coleoptile | 4dN | 232.01 | HC |
| SRR7265416 | coleoptile | 4dN | 443.58 | HC |
| SRR7265417 | coleoptile | 4dN | 170.45 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 19.61 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 24.82 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 18.94 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 10.70 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 30.06 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 9.78 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 14.57 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 17.44 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 20.32 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 18.83 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 18.45 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 9.85 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 15.12 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 40.19 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 284.47 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.35 | HC |
| SRR7265374 | embryo | dry seed 0 h | 11.75 | HC |
| SRR7265375 | embryo | dry seed 0 h | 5.77 | HC |
| SRR7265376 | embryo | 1hA | 6.49 | HC |
| SRR7265377 | embryo | 1hA | 10.04 | HC |
| SRR7265378 | embryo | 1hA | 9.64 | HC |
| SRR7265379 | embryo | 1hN | 4.23 | HC |
| SRR7265380 | embryo | 1hN | 6.29 | HC |
| SRR7265381 | embryo | 1hN | 8.36 | HC |
| SRR7265382 | embryo | 3hA | 23.40 | HC |
| SRR7265383 | embryo | 3hA | 20.96 | HC |
| SRR7265384 | embryo | 3hA | 93.28 | HC |
| SRR7265385 | embryo | 3hN | 12.58 | HC |
| SRR7265386 | embryo | 3hN | 11.11 | HC |
| SRR7265387 | embryo | 3hN | 24.85 | HC |
| SRR7265388 | embryo | 12hA | 51.36 | HC |
| SRR7265389 | embryo | 12hA | 51.90 | HC |
| SRR7265390 | embryo | 12hA | 39.05 | HC |
| SRR7265391 | embryo | 12hN | 54.40 | HC |
| SRR7265392 | embryo | 12hN | 75.45 | HC |
| SRR7265393 | embryo | 12hN | 64.24 | HC |
| SRR7265394 | embryo | 24hA | 50.87 | HC |
| SRR7265395 | embryo | 24hA | 48.81 | HC |
| SRR7265396 | embryo | 24hA | 37.48 | HC |
| SRR7265397 | embryo | 24hN | 1452.25 | HC |
| SRR7265398 | embryo | 24hN | 74.25 | HC |
| SRR7265399 | embryo | 24hN | 69.64 | HC |
| SRR2338866 | endosprem | control | 7.16 | HC |
| SRR2338869 | endosprem | high_temperature | 3.33 | HC |
| SRR976168 | flag_leaf | wild_type | 16.36 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.16 | HC |
| SRR1213690 | flower | wt(flower buds) | 21.93 | HC |
| SRR1213691 | flower | wt | 21.21 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 51.65 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 15.87 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.76 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 19.39 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.40 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.23 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 16.84 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.37 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 14.33 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.54 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 6.62 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 6.62 | HC |
| SRR1761528 | leaf | drought | 6.62 | HC |
| SRR504365 | leaf | wt | 4.59 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.55 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.65 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.13 | HC |
| SRR6417967 | leaf | H2O_control | 5.83 | HC |
| SRR6417968 | leaf | H2O_control | 3.67 | HC |
| SRR6417969 | leaf | H2O_control | 4.11 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.39 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 3.81 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.61 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.72 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 35.70 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 34.41 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 22.63 | HC |
| SRR6502090 | leaf | control | 24.74 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.41 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.95 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 17.57 | HC |
| SRR6502101 | leaf | control | 14.99 | HC |
| SRR5856927 | leaf | control | 3.52 | HC |
| SRR5856928 | leaf | control | 6.13 | HC |
| SRR5856929 | leaf | control | 2.98 | HC |
| SRR5856930 | leaf | salt | 5.84 | HC |
| SRR5856931 | leaf | salt | 4.19 | HC |
| SRR5856932 | leaf | salt | 9.18 | HC |
| SRR5856933 | leaf | control | 5.33 | HC |
| SRR5856934 | leaf | control | 4.61 | HC |
| SRR5856935 | leaf | control | 10.40 | HC |
| SRR5856936 | leaf | salt | 7.27 | HC |
| SRR5856937 | leaf | salt | 8.16 | HC |
| SRR5856938 | leaf | salt | 4.42 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 18.67 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 12.73 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 13.44 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 12.05 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 12.34 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 12.66 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 7.55 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 10.53 | HC |
| SRR6168973 | leaf | none (control) | 17.92 | HC |
| SRR6168974 | leaf | none (control) | 34.52 | HC |
| SRR6168975 | leaf | none (control) | 9.87 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 190.43 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 20.69 | HC |
| SRR5110430 | panicle | Dawn | 25.55 | HC |
| SRR4947496 | root | control | 17.13 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 9.50 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.43 | HC |
| SRR5110438 | panicle | Dawn + 7h | 5.65 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 9.94 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 10.14 | HC |
| SRR5110446 | panicle | Dusk | 42.82 | HC |
| SRR5110447 | panicle | Dusk | 37.76 | HC |
| SRR5110448 | panicle | Dusk | 35.91 | HC |
| SRR5110449 | panicle | Dawn + 14h | 22.19 | HC |
| SRR5110451 | panicle | Dawn + 14h | 9.82 | HC |
| SRR5110452 | panicle | Dawn + 14h | 9.56 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 5.49 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 10.97 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 7.48 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.08 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.48 | HC |
| SRR1633182 | panicle | WT | 33.81 | HC |
| SRR1633185 | panicle | WT | 44.11 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.91 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 13.02 | HC |
| SRR5126153 | root | "mock,7_days" | 15.09 | HC |
| SRR5126155 | root | "mock,7_days" | 5.93 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 12.62 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.17 | HC |
| SRR5126165 | root | "mock,14_days" | 5.72 | HC |
| SRR5126167 | root | "mock,14_days" | 4.70 | HC |
| SRR5126169 | root | "mock,14_days" | 7.14 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 15.45 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 30.28 | HC |
| SRR1213694 | root | wt | 15.54 | HC |
| SRR1213695 | root | wt | 7.29 | HC |
| SRR4947478 | root | control | 19.49 | HC |
| SRR4947479 | root | control | 29.74 | HC |
| SRR4947480 | root | control | 23.31 | HC |
| SRR4947481 | root | control | 31.71 | HC |
| SRR4947482 | root | Al | 306.29 | HC |
| SRR4947483 | root | Al | 24.53 | HC |
| SRR4947484 | root | Al | 37.78 | HC |
| SRR4947485 | root | Al | 16.09 | HC |
| SRR4947487 | root | control | 19.07 | HC |
| SRR4947488 | root | control | 25.28 | HC |
| SRR4947489 | root | control | 25.43 | HC |
| SRR4947490 | root | Al | 43.36 | HC |
| SRR4947491 | root | Al | 40.19 | HC |
| SRR4947492 | root | Al | 30.40 | HC |
| SRR4947493 | root | Al | 21.71 | HC |
| SRR4947494 | root | control | 19.69 | HC |
| SRR4947497 | root | control | 26.31 | HC |
| SRR4947498 | root | Al | 97.86 | HC |
| SRR4947499 | root | Al | 36.70 | HC |
| SRR4947500 | root | Al | 26.45 | HC |
| SRR4947501 | root | Al | 51.30 | HC |
| SRR4947502 | root | control | 27.45 | HC |
| SRR4947503 | root | control | 20.23 | HC |
| SRR4947504 | root | control | 25.84 | HC |
| SRR4947505 | root | control | 18.22 | HC |
| SRR4947506 | root | Al | 21.00 | HC |
| SRR4947507 | root | Al | 50.18 | HC |
| SRR4947508 | root | Al | 21.30 | HC |
| SRR4947509 | root | Al | 18.89 | HC |
| SRR6502091 | root | 100 mM NaCl | 24.27 | HC |
| SRR6502092 | root | 100 mM NaCl | 93.52 | HC |
| SRR6502093 | root | 100 mM NaCl | 14.66 | HC |
| SRR6502094 | root | control | 23.71 | HC |
| SRR6502095 | root | control | 24.84 | HC |
| SRR6502096 | root | control | 726.81 | HC |
| SRR6502103 | root | 100 mM NaCl | 33.87 | HC |
| SRR6502104 | root | 100 mM NaCl | 827.17 | HC |
| SRR6502105 | root | 100 mM NaCl | 29.72 | HC |
| SRR6502106 | root | control | 37.53 | HC |
| SRR6502107 | root | control | 41.85 | HC |
| SRR6502108 | root | control | 29.52 | HC |
| SRR1740435 | root_differentiation_zone | wt | 13.90 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.07 | HC |
| SRR1740431 | root_elongation_zone | wt | 44.54 | HC |
| SRR1740432 | root_elongation_zone | wt | 39.31 | HC |
| SRR1740433 | root_elongation_zone | wt | 42.19 | HC |
| SRR1740430 | root_meristematic_zone | wt | 4.33 | HC |
| SRR6441554 | seedling | wild_type | 3.92 | HC |
| SRR6441555 | seedling | wild_type | 6.77 | HC |
| SRR2154086 | seedling | wt | 77.88 | HC |
| SRR2154082 | seedling | wt | 219.35 | HC |
| SRR2154083 | seedling | wt | 380.30 | HC |
| SRR2154084 | seedling | wt | 85.79 | HC |
| SRR2154085 | seedling | wt | 43.03 | HC |
| SRR2154087 | seedling | wt | 49.51 | HC |
| SRR3098742 | seedling | wt | 4.33 | HC |
| SRR3098743 | seedling | wt | 2.67 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.27 | HC |
| SRR2857720 | seedling | drought_stress_1h | 7.41 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 6.47 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.99 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 44.95 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 42.78 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 260.90 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 16.93 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 18.93 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 38.84 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 221.75 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 327.83 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 37.94 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 10.80 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 7.42 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.01 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 5.39 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.92 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 8.62 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 20.18 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 43.04 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 30.05 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 7.86 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 12.60 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 17.02 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 12.80 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 11.64 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 30.94 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 39.25 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 42.53 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 9.29 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 42.20 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 14.09 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 10.61 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 7.15 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.02 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 31.77 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 83.30 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 10.81 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 11.67 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 17.62 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 21.51 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 209.71 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 14.26 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 15.06 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 12.93 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 11.78 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 17.24 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 138.48 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 26.59 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 23.98 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 50.32 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 35.56 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 54.11 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 21.64 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 5.98 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 9.77 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 43.78 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 54.98 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 50.01 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 19.43 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 65.42 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 30.31 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 55.10 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 9.20 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 75.46 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.64 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 20.36 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 4.97 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 11.94 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 7.78 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.33 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.94 | HC |