| SRR4457252 | 2nd_leaf | DAH12 | 4.41 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.85 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 8.06 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.84 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.88 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 7.35 | HC |
| SRR3745125 | anther | wt | 9.50 | HC |
| SRR358795 | callus | wt | 14.08 | HC |
| SRR358796 | callus | wt | 14.65 | HC |
| SRR358797 | callus | wt | 15.33 | HC |
| SRR358798 | callus | wt | 14.02 | HC |
| SRR5560727 | caryopsis | wild_type | 6.66 | HC |
| SRR5560728 | caryopsis | wild_type | 9.23 | HC |
| SRR5560729 | caryopsis | wild_type | 10.20 | HC |
| SRR4947495 | root | control | 5.64 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.14 | HC |
| SRR7265401 | coleoptile | 2dA | 11.99 | HC |
| SRR7265402 | coleoptile | 2dA | 10.10 | HC |
| SRR7265403 | coleoptile | 2dN | 8.71 | HC |
| SRR7265404 | coleoptile | 2dN | 8.92 | HC |
| SRR7265405 | coleoptile | 2dN | 7.33 | HC |
| SRR7265406 | coleoptile | 3dA | 4.57 | HC |
| SRR7265407 | coleoptile | 3dA | 6.19 | HC |
| SRR7265408 | coleoptile | 3dA | 5.03 | HC |
| SRR7265409 | coleoptile | 3dN | 6.09 | HC |
| SRR7265410 | coleoptile | 3dN | 5.82 | HC |
| SRR7265411 | coleoptile | 3dN | 6.98 | HC |
| SRR7265413 | coleoptile | 4dA | 7.29 | HC |
| SRR7265414 | coleoptile | 4dA | 5.26 | HC |
| SRR7265416 | coleoptile | 4dN | 4.89 | HC |
| SRR7265417 | coleoptile | 4dN | 4.67 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.65 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 9.46 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.62 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 6.42 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.99 | HC |
| SRR7265373 | embryo | dry seed 0 h | 9.59 | HC |
| SRR7265374 | embryo | dry seed 0 h | 6.92 | HC |
| SRR7265375 | embryo | dry seed 0 h | 4.58 | HC |
| SRR7265376 | embryo | 1hA | 9.91 | HC |
| SRR7265377 | embryo | 1hA | 7.76 | HC |
| SRR7265378 | embryo | 1hA | 9.58 | HC |
| SRR7265379 | embryo | 1hN | 11.53 | HC |
| SRR7265380 | embryo | 1hN | 10.81 | HC |
| SRR7265381 | embryo | 1hN | 9.61 | HC |
| SRR7265382 | embryo | 3hA | 9.75 | HC |
| SRR7265383 | embryo | 3hA | 8.80 | HC |
| SRR7265384 | embryo | 3hA | 9.34 | HC |
| SRR7265385 | embryo | 3hN | 11.47 | HC |
| SRR7265386 | embryo | 3hN | 7.48 | HC |
| SRR7265387 | embryo | 3hN | 9.35 | HC |
| SRR7265388 | embryo | 12hA | 5.63 | HC |
| SRR7265390 | embryo | 12hA | 10.39 | HC |
| SRR7265393 | embryo | 12hN | 4.79 | HC |
| SRR7265394 | embryo | 24hA | 7.25 | HC |
| SRR7265395 | embryo | 24hA | 9.67 | HC |
| SRR7265397 | embryo | 24hN | 10.35 | HC |
| SRR7265399 | embryo | 24hN | 5.74 | HC |
| SRR2338866 | endosprem | control | 7.10 | HC |
| SRR2338867 | endosprem | control | 3.42 | HC |
| SRR2338868 | endosprem | high_temperature | 2.62 | HC |
| SRR976168 | flag_leaf | wild_type | 4.66 | HC |
| SRR4457232 | flag_leaf | DAH4 | 6.08 | HC |
| SRR4457233 | flag_leaf | DAH4 | 6.03 | HC |
| SRR4457235 | flag_leaf | DAH12 | 5.98 | HC |
| SRR4457237 | flag_leaf | DAH20 | 7.37 | HC |
| SRR4457238 | flag_leaf | DAH20 | 7.40 | HC |
| SRR4457240 | flag_leaf | DAH28 | 6.48 | HC |
| SRR4457241 | flag_leaf | DAH28 | 4.20 | HC |
| SRR4457242 | flag_leaf | DAH28 | 4.78 | HC |
| SRR4457244 | flag_leaf | DAH36 | 6.90 | HC |
| SRR4457245 | flag_leaf | DAH36 | 5.76 | HC |
| SRR4457246 | flag_leaf | DAH44 | 4.72 | HC |
| SRR1213690 | flower | wt(flower buds) | 11.13 | HC |
| SRR1213691 | flower | wt | 4.67 | HC |
| SRR8060836 | leaf | wild_type | 3.97 | HC |
| SRR8240825 | leaf | wild_type | 2.99 | HC |
| SRR8240819 | leaf | wild_type | 4.39 | HC |
| SRR8240820 | leaf | wild_type | 5.00 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 8.03 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.97 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.71 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 10.85 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.29 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.64 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.62 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 15.12 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.47 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 11.46 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.24 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.66 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.78 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.62 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 11.13 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.69 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.64 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.86 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.97 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 7.67 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 7.63 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 7.68 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 7.63 | HC |
| SRR1761528 | leaf | drought | 7.68 | HC |
| SRR1761530 | leaf | control | 7.63 | HC |
| SRR6417967 | leaf | H2O_control | 5.23 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 4.46 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.79 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.21 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 5.55 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.50 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 6.88 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 7.37 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 6.16 | HC |
| SRR8611900 | leaf | Non-inoculated | 5.31 | HC |
| SRR8611901 | leaf | Non-inoculated | 5.30 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.90 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.27 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.35 | HC |
| SRR1213693 | leaf | wt | 5.10 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 6.69 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 10.96 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 9.96 | HC |
| SRR6502088 | leaf | control | 7.15 | HC |
| SRR6502089 | leaf | control | 8.86 | HC |
| SRR6502090 | leaf | control | 6.45 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.61 | HC |
| SRR6502100 | leaf | control | 7.59 | HC |
| SRR6502101 | leaf | control | 7.03 | HC |
| SRR6502102 | leaf | control | 7.15 | HC |
| SRR5856928 | leaf | control | 4.37 | HC |
| SRR5856929 | leaf | control | 3.10 | HC |
| SRR5856931 | leaf | salt | 4.28 | HC |
| SRR5856935 | leaf | control | 2.80 | HC |
| SRR5856936 | leaf | salt | 4.24 | HC |
| SRR5856937 | leaf | salt | 2.88 | HC |
| SRR5856938 | leaf | salt | 4.79 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 7.84 | HC |
| SRR6168973 | leaf | none (control) | 7.31 | HC |
| SRR6168974 | leaf | none (control) | 6.71 | HC |
| SRR8582888 | panicle | AM | 5.15 | HC |
| SRR8582889 | panicle | AM | 2.24 | HC |
| SRR5110429 | panicle | Dawn | 7.68 | HC |
| SRR5110430 | panicle | Dawn | 6.71 | HC |
| SRR5110431 | panicle | Dawn | 5.02 | HC |
| SRR5110432 | panicle | Dawn | 13.87 | HC |
| SRR4947496 | root | control | 12.58 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 5.16 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.16 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 6.30 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.60 | HC |
| SRR5110438 | panicle | Dawn + 7h | 13.18 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 11.13 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 8.77 | HC |
| SRR5110445 | panicle | Dusk | 11.91 | HC |
| SRR5110446 | panicle | Dusk | 13.27 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.92 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.40 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 7.66 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.49 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 7.46 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 8.95 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.99 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.49 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 7.74 | HC |
| SRR1633182 | panicle | WT | 6.77 | HC |
| SRR1633185 | panicle | WT | 10.54 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 4.02 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 4.61 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 6.94 | HC |
| SRR5126147 | root | "mock,1_day" | 6.08 | HC |
| SRR5126148 | root | "mock,1_day" | 4.50 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.07 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.87 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.76 | HC |
| SRR5126153 | root | "mock,7_days" | 12.18 | HC |
| SRR5126155 | root | "mock,7_days" | 9.01 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.58 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.92 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 9.78 | HC |
| SRR5126169 | root | "mock,14_days" | 5.09 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.48 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.85 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.23 | HC |
| SRR1213695 | root | wt | 3.82 | HC |
| SRR4947478 | root | control | 12.03 | HC |
| SRR4947480 | root | control | 11.40 | HC |
| SRR4947482 | root | Al | 10.86 | HC |
| SRR4947484 | root | Al | 11.10 | HC |
| SRR4947485 | root | Al | 16.06 | HC |
| SRR4947488 | root | control | 7.07 | HC |
| SRR4947489 | root | control | 15.20 | HC |
| SRR4947490 | root | Al | 11.64 | HC |
| SRR4947491 | root | Al | 6.55 | HC |
| SRR4947492 | root | Al | 8.13 | HC |
| SRR4947493 | root | Al | 13.96 | HC |
| SRR4947494 | root | control | 10.08 | HC |
| SRR4947497 | root | control | 14.40 | HC |
| SRR4947498 | root | Al | 14.70 | HC |
| SRR4947499 | root | Al | 10.49 | HC |
| SRR4947500 | root | Al | 12.99 | HC |
| SRR4947501 | root | Al | 15.59 | HC |
| SRR4947503 | root | control | 11.27 | HC |
| SRR4947505 | root | control | 15.36 | HC |
| SRR4947507 | root | Al | 17.33 | HC |
| SRR4947508 | root | Al | 10.56 | HC |
| SRR4947509 | root | Al | 9.62 | HC |
| SRR6502091 | root | 100 mM NaCl | 11.00 | HC |
| SRR6502092 | root | 100 mM NaCl | 10.87 | HC |
| SRR6502093 | root | 100 mM NaCl | 11.65 | HC |
| SRR6502094 | root | control | 11.25 | HC |
| SRR6502095 | root | control | 9.16 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.11 | HC |
| SRR6502105 | root | 100 mM NaCl | 10.32 | HC |
| SRR6502108 | root | control | 11.08 | HC |
| SRR1740434 | root_differentiation_zone | wt | 3.89 | HC |
| SRR1740435 | root_differentiation_zone | wt | 9.64 | HC |
| SRR1740436 | root_differentiation_zone | wt | 12.69 | HC |
| SRR1740431 | root_elongation_zone | wt | 8.66 | HC |
| SRR1740432 | root_elongation_zone | wt | 15.03 | HC |
| SRR1740433 | root_elongation_zone | wt | 9.70 | HC |
| SRR1740428 | root_meristematic_zone | wt | 10.18 | HC |
| SRR1740429 | root_meristematic_zone | wt | 3.78 | HC |
| SRR2154086 | seedling | wt | 10.89 | HC |
| SRR2154083 | seedling | wt | 4.46 | HC |
| SRR2154084 | seedling | wt | 9.49 | HC |
| SRR2154085 | seedling | wt | 16.17 | HC |
| SRR2154087 | seedling | wt | 14.28 | HC |
| SRR3098741 | seedling | wt | 3.75 | HC |
| SRR3098742 | seedling | wt | 4.60 | HC |
| SRR3098743 | seedling | wt | 3.24 | HC |
| SRR2857720 | seedling | drought_stress_1h | 10.28 | HC |
| SRR358791 | seedling | wt | 11.95 | HC |
| SRR358792 | seedling | wt | 12.39 | HC |
| SRR358793 | seedling | wt | 7.70 | HC |
| SRR358794 | seedling | wt | 7.77 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.10 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.38 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 9.60 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 9.57 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 8.56 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 9.46 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 8.63 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 7.26 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 7.60 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 9.20 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 6.06 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 7.30 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 8.45 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.97 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.17 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 8.01 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.06 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.75 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 7.49 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.51 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.95 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 21.47 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 18.93 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 18.62 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 21.46 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 16.31 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 16.34 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 19.28 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 10.50 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 21.92 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 8.00 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 14.61 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.43 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 11.64 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 13.87 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 9.89 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 9.52 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 14.10 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 14.52 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 20.86 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 17.40 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 21.13 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 15.68 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.31 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.33 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 10.37 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.95 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 6.26 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 7.81 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 4.67 | HC |