| SRR4457251 | 2nd_leaf | DAH4 | 4.07 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 5.92 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.97 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.77 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.11 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 8.02 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 6.73 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 11.97 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 11.28 | HC |
| SRR3745127 | anther | wt | 28.11 | HC |
| SRR358795 | callus | wt | 20.15 | HC |
| SRR358796 | callus | wt | 18.91 | HC |
| SRR5560727 | caryopsis | wild_type | 5.26 | HC |
| SRR5560728 | caryopsis | wild_type | 8.97 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.93 | HC |
| SRR4947495 | root | control | 7.84 | HC |
| SRR7265400 | coleoptile | 2dA | 8.81 | HC |
| SRR7265401 | coleoptile | 2dA | 10.25 | HC |
| SRR7265402 | coleoptile | 2dA | 8.69 | HC |
| SRR7265403 | coleoptile | 2dN | 10.08 | HC |
| SRR7265405 | coleoptile | 2dN | 9.57 | HC |
| SRR7265406 | coleoptile | 3dA | 11.94 | HC |
| SRR7265407 | coleoptile | 3dA | 7.98 | HC |
| SRR7265408 | coleoptile | 3dA | 7.65 | HC |
| SRR7265409 | coleoptile | 3dN | 15.41 | HC |
| SRR7265412 | coleoptile | 4dA | 4.25 | HC |
| SRR7265413 | coleoptile | 4dA | 7.24 | HC |
| SRR7265414 | coleoptile | 4dA | 7.45 | HC |
| SRR7265415 | coleoptile | 4dN | 17.35 | HC |
| SRR7265416 | coleoptile | 4dN | 14.23 | HC |
| SRR7265417 | coleoptile | 4dN | 13.46 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 9.62 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 5.60 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 5.41 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 4.58 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.84 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.91 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.60 | HC |
| SRR7265373 | embryo | dry seed 0 h | 7.32 | HC |
| SRR7265374 | embryo | dry seed 0 h | 9.35 | HC |
| SRR7265376 | embryo | 1hA | 5.42 | HC |
| SRR7265377 | embryo | 1hA | 6.84 | HC |
| SRR7265378 | embryo | 1hA | 6.79 | HC |
| SRR7265379 | embryo | 1hN | 7.22 | HC |
| SRR7265380 | embryo | 1hN | 6.25 | HC |
| SRR7265382 | embryo | 3hA | 6.53 | HC |
| SRR7265383 | embryo | 3hA | 6.04 | HC |
| SRR7265384 | embryo | 3hA | 5.01 | HC |
| SRR7265385 | embryo | 3hN | 5.80 | HC |
| SRR7265386 | embryo | 3hN | 5.72 | HC |
| SRR7265388 | embryo | 12hA | 10.94 | HC |
| SRR7265389 | embryo | 12hA | 11.59 | HC |
| SRR7265390 | embryo | 12hA | 4.94 | HC |
| SRR7265393 | embryo | 12hN | 4.85 | HC |
| SRR7265394 | embryo | 24hA | 9.95 | HC |
| SRR7265395 | embryo | 24hA | 10.33 | HC |
| SRR7265396 | embryo | 24hA | 5.52 | HC |
| SRR7265397 | embryo | 24hN | 9.03 | HC |
| SRR7265398 | embryo | 24hN | 7.98 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.72 | HC |
| SRR4457235 | flag_leaf | DAH12 | 4.91 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.58 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.53 | HC |
| SRR4457242 | flag_leaf | DAH28 | 3.92 | HC |
| SRR4457246 | flag_leaf | DAH44 | 5.32 | HC |
| SRR4457247 | flag_leaf | DAH44 | 14.66 | HC |
| SRR1213690 | flower | wt(flower buds) | 3.83 | HC |
| SRR8060835 | leaf | wild_type | 4.34 | HC |
| SRR8240824 | leaf | wild_type | 3.45 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.73 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.51 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.69 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.76 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 14.33 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.68 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.20 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.36 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.31 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 8.27 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.35 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.00 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.12 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 23.73 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.10 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.20 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 11.03 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.84 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.55 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.20 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.74 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 10.11 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 5.64 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 13.22 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 15.16 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 22.22 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 22.86 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 13.21 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 15.16 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 22.22 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 22.86 | HC |
| SRR1761528 | leaf | drought | 13.21 | HC |
| SRR1761529 | leaf | drought | 15.16 | HC |
| SRR1761530 | leaf | control | 22.22 | HC |
| SRR1761531 | leaf | control | 22.86 | HC |
| SRR504365 | leaf | wt | 9.62 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.51 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 10.66 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 19.15 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 9.23 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 10.37 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 12.12 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 12.20 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 11.08 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 10.25 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 15.28 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 10.86 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 14.22 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 9.07 | HC |
| SRR1213693 | leaf | wt | 5.81 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.28 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 13.68 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 13.45 | HC |
| SRR6502088 | leaf | control | 5.77 | HC |
| SRR6502089 | leaf | control | 10.55 | HC |
| SRR6502090 | leaf | control | 9.55 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 15.14 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 14.63 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 5.56 | HC |
| SRR6502100 | leaf | control | 12.06 | HC |
| SRR6502101 | leaf | control | 10.75 | HC |
| SRR6502102 | leaf | control | 8.31 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 28.54 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 16.94 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 22.74 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 14.94 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 13.92 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 26.12 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 15.90 | HC |
| SRR6168973 | leaf | none (control) | 6.19 | HC |
| SRR6168975 | leaf | none (control) | 6.74 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 7.17 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 7.41 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.58 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 5.67 | HC |
| SRR8582889 | panicle | AM | 2.36 | HC |
| SRR8582890 | panicle | AM | 2.53 | HC |
| SRR8582892 | panicle | PM | 15.04 | HC |
| SRR5110429 | panicle | Dawn | 9.74 | HC |
| SRR5110430 | panicle | Dawn | 14.39 | HC |
| SRR5110431 | panicle | Dawn | 12.15 | HC |
| SRR5110432 | panicle | Dawn | 15.38 | HC |
| SRR4947496 | root | control | 8.79 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 16.64 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 5.90 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 13.91 | HC |
| SRR5110437 | panicle | Dawn + 7h | 6.77 | HC |
| SRR5110438 | panicle | Dawn + 7h | 10.52 | HC |
| SRR5110439 | panicle | Dawn + 7h | 23.24 | HC |
| SRR5110440 | panicle | Dawn + 7h | 14.53 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 15.27 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 6.76 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 19.24 | HC |
| SRR5110446 | panicle | Dusk | 4.84 | HC |
| SRR5110447 | panicle | Dusk | 7.32 | HC |
| SRR5110448 | panicle | Dusk | 19.35 | HC |
| SRR5110450 | panicle | Dawn + 14h | 11.65 | HC |
| SRR5110451 | panicle | Dawn + 14h | 5.40 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.12 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 12.67 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 6.24 | HC |
| SRR5110457 | panicle | Dawn + 21h | 13.23 | HC |
| SRR5110458 | panicle | Dawn + 21h | 7.38 | HC |
| SRR5110459 | panicle | Dawn + 21h | 8.16 | HC |
| SRR5110460 | panicle | Dawn + 21h | 11.00 | HC |
| SRR1633182 | panicle | WT | 12.58 | HC |
| SRR1633185 | panicle | WT | 16.17 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.83 | HC |
| SRR1213694 | root | wt | 4.83 | HC |
| SRR1213695 | root | wt | 5.44 | HC |
| SRR4947478 | root | control | 5.57 | HC |
| SRR4947480 | root | control | 9.49 | HC |
| SRR4947481 | root | control | 8.86 | HC |
| SRR4947482 | root | Al | 14.81 | HC |
| SRR4947483 | root | Al | 10.68 | HC |
| SRR4947484 | root | Al | 9.45 | HC |
| SRR4947485 | root | Al | 13.93 | HC |
| SRR4947490 | root | Al | 5.34 | HC |
| SRR4947491 | root | Al | 8.33 | HC |
| SRR4947492 | root | Al | 11.98 | HC |
| SRR4947493 | root | Al | 11.02 | HC |
| SRR4947497 | root | control | 14.63 | HC |
| SRR4947498 | root | Al | 14.50 | HC |
| SRR4947499 | root | Al | 13.25 | HC |
| SRR4947500 | root | Al | 14.16 | HC |
| SRR4947501 | root | Al | 20.78 | HC |
| SRR4947503 | root | control | 12.39 | HC |
| SRR4947504 | root | control | 11.33 | HC |
| SRR4947505 | root | control | 13.29 | HC |
| SRR4947506 | root | Al | 8.28 | HC |
| SRR4947507 | root | Al | 24.40 | HC |
| SRR4947508 | root | Al | 11.84 | HC |
| SRR4947509 | root | Al | 12.59 | HC |
| SRR6502092 | root | 100 mM NaCl | 13.61 | HC |
| SRR6502094 | root | control | 14.22 | HC |
| SRR6502106 | root | control | 14.12 | HC |
| SRR6502108 | root | control | 15.21 | HC |
| SRR1740434 | root_differentiation_zone | wt | 10.68 | HC |
| SRR1740435 | root_differentiation_zone | wt | 15.59 | HC |
| SRR1740436 | root_differentiation_zone | wt | 17.60 | HC |
| SRR1740432 | root_elongation_zone | wt | 8.52 | HC |
| SRR1740433 | root_elongation_zone | wt | 9.56 | HC |
| SRR1740429 | root_meristematic_zone | wt | 5.93 | HC |
| SRR1740430 | root_meristematic_zone | wt | 6.16 | HC |
| SRR2154083 | seedling | wt | 4.59 | HC |
| SRR2154084 | seedling | wt | 6.13 | HC |
| SRR3098742 | seedling | wt | 3.29 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 7.23 | HC |
| SRR1944583 | seedling | no_treatment | 19.25 | HC |
| SRR358791 | seedling | wt | 17.61 | HC |
| SRR358792 | seedling | wt | 17.63 | HC |
| SRR358793 | seedling | wt | 14.80 | HC |
| SRR358794 | seedling | wt | 12.48 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.20 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.94 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.56 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.65 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.79 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.42 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 9.49 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 4.21 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.22 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 4.88 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 7.88 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.59 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.12 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.61 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.86 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.86 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.85 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 23.65 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 24.51 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 25.58 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 24.60 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 21.39 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 12.18 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 24.92 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 23.46 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 28.48 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 27.96 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 14.66 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 30.66 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 25.10 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 26.54 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 30.99 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 14.62 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 21.19 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 16.57 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 13.41 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.63 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 11.85 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 8.92 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 14.49 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 17.90 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 19.77 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 21.39 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 12.03 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 24.61 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 7.36 | HC |