| SRR4457249 | 2nd_leaf | DAH4 | 6.26 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.93 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 6.48 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 11.46 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 5.90 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 7.41 | HC |
| SRR5560729 | caryopsis | wild_type | 6.59 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 5.32 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.96 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.25 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.67 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 9.88 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 8.45 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 12.04 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.70 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.09 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.63 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.25 | HC |
| SRR8060835 | leaf | wild_type | 6.11 | HC |
| SRR8060836 | leaf | wild_type | 4.25 | HC |
| SRR8060837 | leaf | wild_type | 6.86 | HC |
| SRR8240824 | leaf | wild_type | 4.13 | HC |
| SRR8240825 | leaf | wild_type | 4.47 | HC |
| SRR8240820 | leaf | wild_type | 4.15 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.54 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.73 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.65 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 6.05 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 6.05 | HC |
| SRR1761531 | leaf | control | 6.05 | HC |
| SRR8611900 | leaf | Non-inoculated | 6.57 | HC |
| SRR8611901 | leaf | Non-inoculated | 6.47 | HC |
| SRR8611902 | leaf | Non-inoculated | 5.80 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.43 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.13 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 4.53 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 5.43 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.98 | HC |
| SRR1213692 | leaf | wt | 9.01 | HC |
| SRR1213693 | leaf | wt | 21.12 | HC |
| SRR6168973 | leaf | none (control) | 8.08 | HC |
| SRR6168974 | leaf | none (control) | 7.72 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 7.37 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 7.20 | HC |
| SRR6168981 | leaf | none (control) | 3.86 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.99 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.87 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 4.89 | HC |
| SRR4947496 | root | control | 5.87 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 5.08 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.68 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.74 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 4.77 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 11.35 | HC |
| SRR5126148 | root | "mock,1_day" | 4.00 | HC |
| SRR5126149 | root | "mock,1_day" | 5.89 | HC |
| SRR5126153 | root | "mock,7_days" | 5.76 | HC |
| SRR5126155 | root | "mock,7_days" | 6.22 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.43 | HC |
| SRR5126165 | root | "mock,14_days" | 5.37 | HC |
| SRR5126167 | root | "mock,14_days" | 4.10 | HC |
| SRR5126169 | root | "mock,14_days" | 8.42 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.28 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 8.01 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.86 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 4.39 | HC |
| SRR1213695 | root | wt | 15.39 | HC |
| SRR4947484 | root | Al | 8.98 | HC |
| SRR4947485 | root | Al | 6.20 | HC |
| SRR4947488 | root | control | 5.74 | HC |
| SRR4947489 | root | control | 8.14 | HC |
| SRR4947493 | root | Al | 7.67 | HC |
| SRR4947500 | root | Al | 6.95 | HC |
| SRR4947501 | root | Al | 6.51 | HC |
| SRR4947508 | root | Al | 5.81 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.04 | HC |
| SRR6502092 | root | 100 mM NaCl | 9.43 | HC |
| SRR6502093 | root | 100 mM NaCl | 8.66 | HC |
| SRR6502094 | root | control | 7.04 | HC |
| SRR6502095 | root | control | 5.66 | HC |
| SRR6502096 | root | control | 9.28 | HC |
| SRR6502103 | root | 100 mM NaCl | 9.52 | HC |
| SRR6502104 | root | 100 mM NaCl | 7.96 | HC |
| SRR6502105 | root | 100 mM NaCl | 9.72 | HC |
| SRR6502106 | root | control | 8.41 | HC |
| SRR6502107 | root | control | 7.31 | HC |
| SRR6502108 | root | control | 8.19 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.65 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.28 | HC |
| SRR1740431 | root_elongation_zone | wt | 7.37 | HC |
| SRR1740432 | root_elongation_zone | wt | 5.15 | HC |
| SRR1740433 | root_elongation_zone | wt | 6.94 | HC |
| SRR6441555 | seedling | wild_type | 3.28 | HC |
| SRR2154086 | seedling | wt | 5.95 | HC |
| SRR2154085 | seedling | wt | 5.50 | HC |
| SRR2154087 | seedling | wt | 5.72 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.57 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.70 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.46 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.64 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 15.16 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.02 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 10.40 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.23 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.57 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.25 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.60 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.76 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.92 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 5.97 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.89 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 8.65 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 11.95 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 6.18 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 6.66 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 10.96 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 10.20 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 11.84 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.55 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 10.38 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 11.79 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 11.81 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 14.93 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 12.33 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 11.44 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 12.22 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 11.24 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 10.70 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 11.89 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 13.57 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 13.87 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 12.64 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 9.92 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 13.45 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 11.98 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 10.24 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 7.81 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 8.06 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.65 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 7.37 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.37 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.38 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.51 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.82 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.27 | HC |