| SRR4457252 | 2nd_leaf | DAH12 | 4.09 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 4.22 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 4.49 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 4.33 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.48 | HC |
| SRR358798 | callus | wt | 9.66 | HC |
| SRR6320473 | carpel | wt | 15.84 | HC |
| SRR6320498 | carpel | wt | 14.45 | HC |
| SRR5560727 | caryopsis | wild_type | 8.58 | HC |
| SRR5560728 | caryopsis | wild_type | 8.78 | HC |
| SRR5560729 | caryopsis | wild_type | 8.81 | HC |
| SRR7265400 | coleoptile | 2dA | 4.44 | HC |
| SRR7265402 | coleoptile | 2dA | 4.08 | HC |
| SRR7265405 | coleoptile | 2dN | 4.04 | HC |
| SRR7265406 | coleoptile | 3dA | 4.69 | HC |
| SRR7265407 | coleoptile | 3dA | 4.37 | HC |
| SRR7265409 | coleoptile | 3dN | 4.36 | HC |
| SRR7265412 | coleoptile | 4dA | 4.87 | HC |
| SRR7265413 | coleoptile | 4dA | 8.27 | HC |
| SRR7265414 | coleoptile | 4dA | 5.73 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.24 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 5.07 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.24 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.27 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.07 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 6.45 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.59 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 6.17 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.33 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.70 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 4.42 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 4.63 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 5.60 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.01 | HC |
| SRR7265374 | embryo | dry seed 0 h | 4.86 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.27 | HC |
| SRR7265376 | embryo | 1hA | 4.71 | HC |
| SRR7265377 | embryo | 1hA | 4.17 | HC |
| SRR7265378 | embryo | 1hA | 5.16 | HC |
| SRR7265379 | embryo | 1hN | 3.74 | HC |
| SRR7265381 | embryo | 1hN | 3.69 | HC |
| SRR7265382 | embryo | 3hA | 9.76 | HC |
| SRR7265383 | embryo | 3hA | 9.31 | HC |
| SRR7265384 | embryo | 3hA | 10.01 | HC |
| SRR7265385 | embryo | 3hN | 4.96 | HC |
| SRR7265386 | embryo | 3hN | 4.31 | HC |
| SRR7265387 | embryo | 3hN | 4.51 | HC |
| SRR7265398 | embryo | 24hN | 4.82 | HC |
| SRR2338867 | endosprem | control | 3.13 | HC |
| SRR2338868 | endosprem | high_temperature | 2.84 | HC |
| SRR2338869 | endosprem | high_temperature | 3.88 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.13 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.67 | HC |
| SRR1213691 | flower | wt | 5.19 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.67 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.31 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.56 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.75 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.35 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.98 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.60 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 7.54 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.46 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.06 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.67 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.18 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.41 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.20 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 11.48 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 8.17 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 11.48 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 8.17 | HC |
| SRR1761528 | leaf | drought | 11.48 | HC |
| SRR1761529 | leaf | drought | 8.17 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.10 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 10.05 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 7.25 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.22 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 7.09 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.15 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 8.66 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.65 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 4.10 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.78 | HC |
| SRR1213693 | leaf | wt | 4.83 | HC |
| SRR5856928 | leaf | control | 2.83 | HC |
| SRR5856929 | leaf | control | 2.71 | HC |
| SRR5856930 | leaf | salt | 3.66 | HC |
| SRR5856931 | leaf | salt | 2.90 | HC |
| SRR5856932 | leaf | salt | 2.41 | HC |
| SRR5856934 | leaf | control | 3.97 | HC |
| SRR5856935 | leaf | control | 4.16 | HC |
| SRR5856936 | leaf | salt | 4.33 | HC |
| SRR5856937 | leaf | salt | 4.28 | HC |
| SRR5856938 | leaf | salt | 3.76 | HC |
| SRR6168979 | leaf | none (control) | 3.82 | HC |
| SRR6168980 | leaf | none (control) | 5.06 | HC |
| SRR6168981 | leaf | none (control) | 7.11 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 9.75 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 7.31 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 9.28 | HC |
| SRR5110429 | panicle | Dawn | 6.27 | HC |
| SRR5110431 | panicle | Dawn | 8.07 | HC |
| SRR5110432 | panicle | Dawn | 4.36 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 8.34 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 5.16 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.58 | HC |
| SRR5110437 | panicle | Dawn + 7h | 4.28 | HC |
| SRR5110438 | panicle | Dawn + 7h | 5.29 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.82 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.07 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.87 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.17 | HC |
| SRR5110446 | panicle | Dusk | 6.16 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.08 | HC |
| SRR5110451 | panicle | Dawn + 14h | 5.85 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.08 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.44 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.73 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.21 | HC |
| SRR5110458 | panicle | Dawn + 21h | 4.21 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.47 | HC |
| SRR5110460 | panicle | Dawn + 21h | 9.83 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.08 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 15.23 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 16.52 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 11.88 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 13.94 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 14.82 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 12.34 | HC |
| SRR5126147 | root | "mock,1_day" | 5.64 | HC |
| SRR5126148 | root | "mock,1_day" | 4.44 | HC |
| SRR5126149 | root | "mock,1_day" | 8.81 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 9.10 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 10.81 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.97 | HC |
| SRR5126153 | root | "mock,7_days" | 5.33 | HC |
| SRR5126155 | root | "mock,7_days" | 5.80 | HC |
| SRR5126157 | root | "mock,7_days" | 9.19 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.58 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.09 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.42 | HC |
| SRR5126165 | root | "mock,14_days" | 6.28 | HC |
| SRR5126167 | root | "mock,14_days" | 5.36 | HC |
| SRR5126169 | root | "mock,14_days" | 7.24 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.36 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.58 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 8.51 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.55 | HC |
| SRR1213694 | root | wt | 4.21 | HC |
| SRR1213695 | root | wt | 5.20 | HC |
| SRR4947490 | root | Al | 4.85 | HC |
| SRR4947502 | root | control | 6.11 | HC |
| SRR4947504 | root | control | 5.60 | HC |
| SRR4947506 | root | Al | 4.30 | HC |
| SRR4947507 | root | Al | 5.79 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.73 | HC |
| SRR6502093 | root | 100 mM NaCl | 5.96 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.62 | HC |
| SRR6502104 | root | 100 mM NaCl | 8.27 | HC |
| SRR6502105 | root | 100 mM NaCl | 7.06 | HC |
| SRR6502106 | root | control | 4.53 | HC |
| SRR6502107 | root | control | 4.31 | HC |
| SRR6502108 | root | control | 5.13 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.76 | HC |
| SRR2857721 | seedling | drought_stress_6h | 10.84 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 8.61 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.60 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.76 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.07 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.58 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 10.11 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 8.87 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 9.70 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 8.85 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 9.27 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 9.24 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.38 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 9.52 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 15.24 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.72 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 4.23 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.77 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.82 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.28 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.36 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.65 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.19 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 5.34 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.98 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.74 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.01 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 4.34 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.84 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.74 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.17 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.66 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.59 | HC |