| SRR5560727 | caryopsis | wild_type | 6.81 | HC |
| SRR5560728 | caryopsis | wild_type | 6.10 | HC |
| SRR5560729 | caryopsis | wild_type | 8.75 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.74 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 12.19 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.41 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 7.55 | HC |
| SRR2338867 | endosprem | control | 4.78 | HC |
| SRR2338868 | endosprem | high_temperature | 4.00 | HC |
| SRR8240824 | leaf | wild_type | 3.95 | HC |
| SRR8240825 | leaf | wild_type | 3.32 | HC |
| SRR8240826 | leaf | wild_type | 4.19 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.54 | HC |
| SRR6417969 | leaf | H2O_control | 3.91 | HC |
| SRR8611900 | leaf | Non-inoculated | 10.71 | HC |
| SRR8611901 | leaf | Non-inoculated | 10.06 | HC |
| SRR8611902 | leaf | Non-inoculated | 12.35 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.17 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 10.00 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 9.98 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.45 | HC |
| SRR6168973 | leaf | none (control) | 8.46 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.05 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 12.30 | HC |
| SRR6168981 | leaf | none (control) | 4.19 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.45 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 4.19 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.34 | HC |
| SRR4947496 | root | control | 5.52 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.35 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.93 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 8.81 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.03 | HC |
| SRR5126147 | root | "mock,1_day" | 5.15 | HC |
| SRR5126148 | root | "mock,1_day" | 6.12 | HC |
| SRR5126149 | root | "mock,1_day" | 7.85 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.07 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.21 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.28 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.23 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.67 | HC |
| SRR4947489 | root | control | 5.59 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.76 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.42 | HC |
| SRR6502094 | root | control | 6.55 | HC |
| SRR6502095 | root | control | 5.50 | HC |
| SRR6502105 | root | 100 mM NaCl | 7.17 | HC |
| SRR6502106 | root | control | 4.83 | HC |
| SRR6502107 | root | control | 4.22 | HC |
| SRR6502108 | root | control | 4.99 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.08 | HC |
| SRR1740429 | root_meristematic_zone | wt | 8.56 | HC |
| SRR1740430 | root_meristematic_zone | wt | 7.41 | HC |
| SRR6441554 | seedling | wild_type | 4.02 | HC |
| SRR6441555 | seedling | wild_type | 4.16 | HC |
| SRR3098741 | seedling | wt | 3.37 | HC |
| SRR3098742 | seedling | wt | 3.50 | HC |
| SRR3098743 | seedling | wt | 2.75 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.30 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 6.42 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 12.60 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.18 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.57 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.43 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.61 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.15 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 11.63 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 15.27 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 9.27 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 11.05 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.49 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 10.20 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 12.36 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 13.45 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 10.24 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 9.56 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 8.52 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 9.25 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 10.72 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 11.65 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.30 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 9.72 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 10.36 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 8.63 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 9.49 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 8.42 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.08 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 7.19 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 7.26 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.44 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 6.75 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.54 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 6.66 | HC |